Resource

Id Histone_ChIP-seq/ENCSR948TOScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR948TOS [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (54 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR948TOS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue male adult (54 years)
  • date_created: 2018-05-11T18:45:36.734034+00:00
  • date_released: 2018-12-11
  • doi: 10.17989/ENCSR948TOS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR948TOS float

Histone_ChIP-seq_ENCSR948TOS
Histone_ChIP-seq ENCSR948TOS [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (54 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR948TOS [1.3, 79.3]
n
94,388,467
mean
14.6
sd
12.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 943884672.93% 70267
chr1 9505807 3.82% 6883
chr1_KI270713v1_random 647 1.59% 1
chr2 6984163 2.88% 5474
chr3 5740446 2.89% 4451
chr4 2995599 1.57% 2529
chr5 4284240 2.36% 3290
chr6 4869214 2.85% 3870
chr7 4013924 2.52% 3217
chr8 3609615 2.49% 2858
chr9 4298491 3.11% 3193
chr10 4669468 3.49% 3509
chr11 5113201 3.79% 3639
chr12 4783003 3.59% 3492
chr13 1856205 1.62% 1541
chr14 3156610 2.95% 2313
chr15 3332766 3.27% 2459
chr16 3994360 4.42% 2851
chr17 5965631 7.17% 3921
chr18 1587472 1.98% 1343
chr19 5145337 8.78% 3233
chr20 2939693 4.56% 2079
chr21 1204134 2.58% 958
chr22 2648176 5.21% 1818
chr22_KI270733v1_random 332 0.18% 1
chrUn_GL000195v1 346 0.19% 1
chrUn_GL000218v1 358 0.22% 1
chrUn_GL000219v1 1900 1.06% 2
chrX 1645494 1.05% 1309
chrY 41835 0.07% 31
3337 contigs with no values (128333327 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70267 215 35849 1343.28 907
global segment-length histogram

Files

Filename Size md5
ENCFF090ISC.bed.gz 1.66 MB 7ea4051c043899b5c0e9a43c045d36f2
ENCFF090ISC.tabix.bed.gz 763.16 KB 1a53bdf2f39718e65f378fc647f606a9
ENCFF090ISC.tabix.bed.gz.tbi 226.4 KB a5292ec6d8092b9462e8f872f5c5a5ba
genomic_resource.yaml 1.54 KB d0558177d6b99b218241352e78d388b6
statistics/