Resource

Id Histone_ChIP-seq/ENCSR943PIRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR943PIR [biosample_summary="Homo sapiens muscle layer of colon tissue female adult (77 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR943PIR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0012489/
  • biosample_summary: Homo sapiens muscle layer of colon tissue female adult (77 years)
  • date_created: 2015-09-15T19:52:39.424713+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR943PIR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (77 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR943PIR float

Histone_ChIP-seq_ENCSR943PIR
Histone_ChIP-seq ENCSR943PIR [biosample_summary="Homo sapiens muscle layer of colon tissue female adult (77 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR943PIR [1.76, 38.1]
n
46,153,345
mean
11.5
sd
5.96

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 461533451.43% 37788
chr1 4540335 1.82% 3600
chr2 3264208 1.35% 2704
chr3 2695433 1.36% 2137
chr4 1938758 1.02% 1550
chr5 2239745 1.23% 1722
chr6 2631400 1.54% 2020
chr7 2196717 1.38% 1801
chr8 1691959 1.17% 1410
chr9 2027248 1.46% 1724
chr10 2099086 1.57% 1809
chr11 2513232 1.86% 1989
chr12 2527783 1.90% 2018
chr13 946519 0.83% 801
chr14 1521318 1.42% 1223
chr15 1499270 1.47% 1202
chr16 1693682 1.87% 1445
chr17 2527231 3.04% 2054
chr18 806521 1.00% 703
chr19 3031015 5.17% 2613
chr20 1143126 1.77% 975
chr21 454199 0.97% 405
chr22 986416 1.94% 855
chrX 1178144 0.76% 1028
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 37788 245 19701 1221.38 930
global segment-length histogram

Files

Filename Size md5
ENCFF435EWO.bed.gz 938.73 KB 6b5b8c1b0851ff8c19931ef04435ea57
ENCFF435EWO.tabix.bed.gz 418.49 KB a8f48214302a411caa803ca3b6bbed38
ENCFF435EWO.tabix.bed.gz.tbi 190.41 KB e9edd1e40c1688b1e5c7934e0dd0bd95
genomic_resource.yaml 1.54 KB ee5946178fda08e4924ce85b7d529845
statistics/