Resource

Id Histone_ChIP-seq/ENCSR943JOFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR943JOF [biosample_summary="Homo sapiens pancreas tissue male adult (34 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR943JOF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue male adult (34 years)
  • date_created: 2015-10-01T07:17:03.408434+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR943JOF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (34 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR943JOF float

Histone_ChIP-seq_ENCSR943JOF
Histone_ChIP-seq ENCSR943JOF [biosample_summary="Homo sapiens pancreas tissue male adult (34 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR943JOF [1.84, 41.8]
n
38,478,096
mean
5.44
sd
1.76

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 384780961.20% 99971
chr1 3519036 1.41% 9348
chr2 2443708 1.01% 7065
chr3 1977046 1.00% 5484
chr4 1286744 0.68% 3695
chr5 1460475 0.80% 4183
chr6 1491263 0.87% 4261
chr7 2003636 1.26% 5325
chr8 1233391 0.85% 3482
chr9 1906497 1.38% 4776
chr10 1517591 1.13% 4378
chr11 2140562 1.58% 5263
chr12 1973723 1.48% 5112
chr13 665401 0.58% 2049
chr14 1171093 1.09% 3277
chr15 1219847 1.20% 3427
chr16 2240813 2.48% 5100
chr17 2502948 3.01% 5946
chr18 534765 0.67% 1654
chr19 3298774 5.63% 6954
chr20 1309889 2.03% 3219
chr21 519597 1.11% 1290
chr22 1473508 2.90% 3175
chrX 566614 0.36% 1443
chrY 21175 0.04% 65
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 99971 125 8011 384.89 297
global segment-length histogram

Files

Filename Size md5
ENCFF543KPU.bed.gz 1.99 MB 65489f5e0136e99d9f0a178f9e96401a
ENCFF543KPU.tabix.bed.gz 978.38 KB 8db9c2bbdd024588c6f97a6a470bb203
ENCFF543KPU.tabix.bed.gz.tbi 216.35 KB 8a7c8a4d7381eb56d24943a2cbe96887
genomic_resource.yaml 2.2 KB 56750822999b356bdfed2b4a629be2e6
statistics/