Resource

Id Histone_ChIP-seq/ENCSR942UILcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR942UIL [biosample_summary="Homo sapiens thyroid gland tissue female adult (51 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR942UIL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002046/
  • biosample_summary: Homo sapiens thyroid gland tissue female adult (51 years)
  • date_created: 2017-12-06T21:22:10.903942+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR942UIL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR942UIL float

Histone_ChIP-seq_ENCSR942UIL
Histone_ChIP-seq ENCSR942UIL [biosample_summary="Homo sapiens thyroid gland tissue female adult (51 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR942UIL [1.7, 10.7]
n
39,394,637
mean
3.7
sd
1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 393946371.22% 76907
chr1 4089320 1.64% 7946
chr1_KI270711v1_random 286 0.68% 2
chr2 2646190 1.09% 5629
chr3 2203550 1.11% 4596
chr4 1208647 0.64% 2894
chr5 1744433 0.96% 3740
chr6 1674249 0.98% 3498
chr7 1681472 1.06% 3442
chr8 1370781 0.94% 2655
chr9 1689920 1.22% 3230
chr10 1650134 1.23% 3485
chr11 2152814 1.59% 3908
chr12 2441904 1.83% 4452
chr13 614859 0.54% 1446
chr14 1398230 1.31% 2801
chr15 1349467 1.32% 2875
chr16 2081308 2.30% 3624
chr17 2592164 3.11% 4589
chr18 480971 0.60% 1115
chr19 3054506 5.21% 4747
chr20 1216215 1.89% 2348
chr21 421411 0.90% 875
chr22 1232841 2.43% 2084
chrUn_GL000195v1 250 0.14% 2
chrUn_GL000219v1 1797 1.00% 8
chrX 396749 0.25% 915
chrY 169 <0.01% 1
3339 contigs with no values (128672781 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 76907 110 31563 512.24 339
global segment-length histogram

Files

Filename Size md5
ENCFF389HNN.bed.gz 1.49 MB 1c33fa806c587576bd828ae7eaa9229a
ENCFF389HNN.tabix.bed.gz 760.97 KB 2384e8f9ed6d9718d6924d72e575f7af
ENCFF389HNN.tabix.bed.gz.tbi 137.39 KB 6f303142fb1fc5dac9eaccd647494219
genomic_resource.yaml 1.52 KB 065ee9d52f26ec77dc6b6223ed75ee56
statistics/