Resource

Id Histone_ChIP-seq/ENCSR942NMEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR942NME [biosample_summary="Homo sapiens IMR-90" and target="H3K23ac"]
Description
Labels
  • accession: ENCSR942NME
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001196/
  • biosample_summary: Homo sapiens IMR-90
  • date_created: 2015-10-01T07:15:56.959926+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR942NME
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K23ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR942NME float

Histone_ChIP-seq_ENCSR942NME
Histone_ChIP-seq ENCSR942NME [biosample_summary="Homo sapiens IMR-90" and target="H3K23ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR942NME [1.65, 25.1]
n
57,321,437
mean
5.36
sd
2.18

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 573214371.78% 154411
chr1 5389700 2.16% 14326
chr2 5039237 2.08% 13569
chr3 3729209 1.88% 10278
chr4 2442224 1.28% 7035
chr5 3478094 1.92% 9313
chr6 3312152 1.94% 9306
chr7 2727433 1.71% 7492
chr8 2546864 1.75% 7211
chr9 2522613 1.82% 6680
chr10 2696421 2.02% 7361
chr11 3358706 2.49% 8606
chr12 3125838 2.35% 8344
chr13 1461664 1.28% 4186
chr14 1814772 1.70% 4916
chr15 2350478 2.30% 6130
chr16 1812112 2.01% 4643
chr17 2856642 3.43% 7172
chr18 1196319 1.49% 3377
chr19 1673554 2.86% 4267
chr20 1454890 2.26% 3853
chr21 657652 1.41% 1764
chr22 1097295 2.16% 2819
chrX 577568 0.37% 1763
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 154411 120 6298 371.23 288
global segment-length histogram

Files

Filename Size md5
ENCFF712SFS.bed.gz 3.43 MB efa56569bedc545781316f68a83ea581
ENCFF712SFS.tabix.bed.gz 1.54 MB 292f5e2c2043704153ad779878e6a336
ENCFF712SFS.tabix.bed.gz.tbi 320.87 KB 369db9e4cd5b2d83a233fd77c605e568
genomic_resource.yaml 1.86 KB dee7a512976fc16dbf6d9a04b9ef031b
statistics/