Resource

Id Histone_ChIP-seq/ENCSR941WHTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR941WHT [biosample_summary="Homo sapiens stomach smooth muscle tissue female adult (84 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR941WHT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004222/
  • biosample_summary: Homo sapiens stomach smooth muscle tissue female adult (84 years)
  • date_created: 2015-09-15T19:52:34.137535+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR941WHT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (84 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR941WHT float

Histone_ChIP-seq_ENCSR941WHT
Histone_ChIP-seq ENCSR941WHT [biosample_summary="Homo sapiens stomach smooth muscle tissue female adult (84 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR941WHT [1.91, 23.6]
n
33,434,537
mean
5.69
sd
1.95

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 334345371.04% 90082
chr1 3628608 1.46% 9573
chr2 1896712 0.78% 4856
chr3 973012 0.49% 2574
chr4 838726 0.44% 2111
chr5 1369520 0.75% 3486
chr6 1483335 0.87% 3596
chr7 1309023 0.82% 3307
chr8 1371451 0.94% 3781
chr9 1253395 0.91% 3123
chr10 1538182 1.15% 4098
chr11 1603855 1.19% 4471
chr12 1538601 1.15% 4043
chr13 594806 0.52% 1544
chr14 939819 0.88% 2545
chr15 879745 0.86% 2422
chr16 1119996 1.24% 3163
chr17 2098995 2.52% 5155
chr18 469041 0.58% 1425
chr19 1920341 3.28% 4889
chr20 1533472 2.38% 4121
chr21 401445 0.86% 1128
chr22 990618 1.95% 2913
chrX 3681839 2.36% 11758
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 90082 160 8358 371.16 277
global segment-length histogram

Files

Filename Size md5
ENCFF266AIP.bed.gz 1.37 MB b0353b464c93297c15890d32ecaf6b7b
ENCFF266AIP.tabix.bed.gz 752.02 KB bdc65bfdf2ae0ef57e6de2c08362cd06
ENCFF266AIP.tabix.bed.gz.tbi 215.25 KB e42a267e36460796bb612fca0e091463
genomic_resource.yaml 2.05 KB e35cfe0c0bce967d443e31c4213da8c7
statistics/