Histone_ChIP-seq_ENCSR930HLX
Histone_ChIP-seq ENCSR930HLX [biosample_summary="Homo sapiens thoracic aorta tissue male adult (54 years)" and target="H3K4me3"]
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| Id: | Histone_ChIP-seq/ENCSR930HLX |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR930HLX [biosamplesummary="Homo sapiens thoracic aorta tissue male adult (54 years)" and target="H3K4me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: male adult (54 years) output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN409IEW|/analyses/ENCAN409IEW/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF502AXL|/files/ENCFF502AXL/} processed by ChIP-seq ENCODE3 hg19 pipeline was generated from a library with PBC1 value of 0.89. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR930HLX | float |
Histone_ChIP-seq_ENCSR930HLX |
Histone_ChIP-seq ENCSR930HLX [biosample_summary="Homo sapiens thoracic aorta tissue male adult (54 years)" and target="H3K4me3"]
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[1.47, 38.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF554OEO.bed.gz | 1.39 MB | 7b5e0c49f8c98fe274c9832a662834fe |
| ENCFF554OEO.bed.gz.dvc | 101.0 B | db680e4473a3496b32f752b7a0388f68 |
| ENCFF554OEO.tabix.bed.gz | 604.18 KB | ce440e927ce5769b720ddb396f92b2df |
| ENCFF554OEO.tabix.bed.gz.dvc | 106.0 B | 4a7cd2681ca59d753700617e87730ffa |
| ENCFF554OEO.tabix.bed.gz.tbi | 256.44 KB | f3e5744d359ccf375c804ec2be60683c |
| ENCFF554OEO.tabix.bed.gz.tbi.dvc | 110.0 B | a4e981dc0c904c83f9ba38afaf8b0ba1 |
| genomic_resource.yaml | 2.14 KB | 0e60844bfb3b344ff0a1a426ac6e0044 |
| genomic_resource_original.yaml | 2.0 KB | 95385dd7655af282ac0b42df250759c5 |
| statistics/ |