Resource

Id Histone_ChIP-seq/ENCSR927IOScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR927IOS [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR927IOS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-01-28T04:10:46.160718+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR927IOS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR927IOS float

Histone_ChIP-seq_ENCSR927IOS
Histone_ChIP-seq ENCSR927IOS [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR927IOS [1.88, 63.3]
n
149,910,967
mean
11.9
sd
9.03

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1499109674.66% 89613
chr1 14859948 5.97% 8595
chr2 11093537 4.58% 6857
chr3 9195933 4.64% 5653
chr4 6278131 3.30% 3852
chr5 8108152 4.47% 5046
chr6 8022258 4.70% 4869
chr7 7080904 4.44% 4524
chr8 6120386 4.22% 3769
chr9 7236436 5.23% 4135
chr10 7754459 5.80% 4416
chr11 9034306 6.69% 5106
chr12 7613588 5.71% 4727
chr13 3573273 3.12% 2242
chr14 5081012 4.75% 2979
chr15 5322211 5.22% 3066
chr16 5102081 5.65% 3116
chr17 8108203 9.74% 4514
chr18 3118379 3.88% 1935
chr19 5712302 9.75% 3284
chr20 4172043 6.47% 2456
chr21 1620793 3.47% 1002
chr22 3439776 6.77% 1967
chrX 2262856 1.45% 1503
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 89613 225 88292 1672.87 1036
global segment-length histogram

Files

Filename Size md5
ENCFF528AIU.bed.gz 2.02 MB b1cd9c763bee62d88ff6e5f1efbb2acd
ENCFF528AIU.tabix.bed.gz 949.32 KB e9d6c43fa2cc94f00cecd4fb77d96bdc
ENCFF528AIU.tabix.bed.gz.tbi 258.4 KB 24409442926bec1e2a434d44edd2d13a
genomic_resource.yaml 1.75 KB 9f23159ea43d76e3c10bd8f3f427d511
statistics/