Resource

Id Histone_ChIP-seq/ENCSR923IIUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR923IIU [biosample_summary="Homo sapiens subcutaneous abdominal adipose tissue tissue nuclear fraction female adult (59 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR923IIU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0014455/
  • biosample_summary: Homo sapiens subcutaneous abdominal adipose tissue tissue nuclear fraction female adult (59 years)
  • date_created: 2015-09-15T19:52:45.112987+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR923IIU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years) nuclear fraction
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR923IIU float

Histone_ChIP-seq_ENCSR923IIU
Histone_ChIP-seq ENCSR923IIU [biosample_summary="Homo sapiens subcutaneous abdominal adipose tissue tissue nuclear fraction female adult (59 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR923IIU [1.83, 102]
n
47,847,812
mean
35.3
sd
23.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 478478121.49% 37165
chr1 4560330 1.83% 3441
chr2 3186887 1.32% 2490
chr3 2684924 1.35% 1975
chr4 1930546 1.01% 1515
chr5 2355131 1.30% 1796
chr6 2736794 1.60% 2017
chr7 2361642 1.48% 1898
chr8 1760306 1.21% 1375
chr9 2009388 1.45% 1585
chr10 2090587 1.56% 1659
chr11 2552088 1.89% 1834
chr12 2602808 1.95% 1903
chr13 1017758 0.89% 834
chr14 1466977 1.37% 1083
chr15 1530945 1.50% 1161
chr16 1822506 2.02% 1494
chr17 2762546 3.32% 2103
chr18 823894 1.03% 692
chr19 3487997 5.95% 3006
chr20 1198709 1.86% 941
chr21 498203 1.07% 431
chr22 1023448 2.01% 822
chrX 1382360 0.89% 1107
chrY 1038 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 37165 183 11848 1287.44 919
global segment-length histogram

Files

Filename Size md5
ENCFF266XUO.bed.gz 933.87 KB 1c9efc4e343a4f8e335cfe0f1377beb2
ENCFF266XUO.tabix.bed.gz 413.03 KB 5b17f974ef47e2a524e9ceca91c24166
ENCFF266XUO.tabix.bed.gz.tbi 195.76 KB 5353d29f79d5ea4223aeaa293004548c
genomic_resource.yaml 1.67 KB 75d8a6b8aad07489f1801a8a705b044c
statistics/