Resource

Id Histone_ChIP-seq/ENCSR922KKScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR922KKS [biosample_summary="Homo sapiens spleen tissue female adult (59 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR922KKS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (59 years)
  • date_created: 2020-05-01T03:02:42.031543+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR922KKS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR922KKS float

Histone_ChIP-seq_ENCSR922KKS
Histone_ChIP-seq ENCSR922KKS [biosample_summary="Homo sapiens spleen tissue female adult (59 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR922KKS [1.73, 9.92]
n
49,644,343
mean
3.97
sd
1.01

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 496443431.54% 65091
chr1 5100079 2.05% 6553
chr2 3736457 1.54% 4954
chr3 2954946 1.49% 3999
chr4 1593517 0.84% 2223
chr5 2237090 1.23% 3000
chr6 2703624 1.58% 3727
chr7 2128017 1.34% 2950
chr8 1879171 1.29% 2498
chr9 2172587 1.57% 2809
chr10 2452536 1.83% 3226
chr11 2937864 2.17% 3699
chr12 2594369 1.95% 3329
chr13 998206 0.87% 1381
chr14 1840293 1.72% 2393
chr15 1751400 1.72% 2262
chr16 2124720 2.35% 2672
chr17 3240528 3.89% 4074
chr18 767234 0.95% 1065
chr19 2617818 4.47% 3216
chr20 1523249 2.36% 1969
chr21 521580 1.12% 708
chr22 1365582 2.69% 1731
chrX 403476 0.26% 653
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 65091 205 14373 762.69 588
global segment-length histogram

Files

Filename Size md5
ENCFF997KKX.bed.gz 1.21 MB 0132c515d56dc0b12ce99a1f99bc02a9
ENCFF997KKX.tabix.bed.gz 643.96 KB 21b946daa2cdf5877f5057723daf79a2
ENCFF997KKX.tabix.bed.gz.tbi 211.95 KB b1be3aeb8f839e6075710f78125e28a3
genomic_resource.yaml 1.71 KB dac06b77060bd8e9836b430afdda07b2
statistics/