Histone_ChIP-seq_ENCSR919DBC
Histone_ChIP-seq ENCSR919DBC [biosample_summary="Homo sapiens HUES6" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR919DBC |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR919DBC [biosamplesummary="Homo sapiens HUES6" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN420HJG|/analyses/ENCAN420HJG/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN420HJG|/analyses/ENCAN420HJG/} has in progress subobject document {85a687a0-8a6d-4523-832d-6d7d2e620612|/documents/85a687a0-8a6d-4523-832d-6d7d2e620612/} audit_not_compliant: Processed alignments file {ENCFF003PIE|/files/ENCFF003PIE/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 29770154 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF977KHF|/files/ENCFF977KHF/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 26987776 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR919DBC | float |
Histone_ChIP-seq_ENCSR919DBC |
Histone_ChIP-seq ENCSR919DBC [biosample_summary="Homo sapiens HUES6" and target="H3K4me1"]
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[1.54, 14.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF100AUQ.bed.gz | 4.42 MB | 4327cf73f02c70ab7a02533c3b8a535e |
| ENCFF100AUQ.bed.gz.dvc | 101.0 B | c247c6bba42b75df7f27c6e725efb4d5 |
| ENCFF100AUQ.tabix.bed.gz | 1.98 MB | eac897a2668907209bd32f5c9a644225 |
| ENCFF100AUQ.tabix.bed.gz.dvc | 107.0 B | 2e68f8149aabad2fb5f7b65ed8bd18ae |
| ENCFF100AUQ.tabix.bed.gz.tbi | 492.13 KB | 3e7eb5910894e50ba94fe8e7b2717568 |
| ENCFF100AUQ.tabix.bed.gz.tbi.dvc | 110.0 B | b3edb25f0564be444df2a5f9b79e68ae |
| genomic_resource.yaml | 2.61 KB | 3e62b4ee47cd0e299d3387ced212b441 |
| genomic_resource_original.yaml | 2.5 KB | b944c9cf92e05a0f689dc47b43f0d0e2 |
| statistics/ |