Resource

Id Histone_ChIP-seq/ENCSR914RMXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR914RMX [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR914RMX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-01-28T04:10:47.047673+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR914RMX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR914RMX float

Histone_ChIP-seq_ENCSR914RMX
Histone_ChIP-seq ENCSR914RMX [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR914RMX [1.61, 12.8]
n
68,393,884
mean
4.4
sd
1.92

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 683938842.13% 64516
chr1 2901089 1.17% 2577
chr2 2800937 1.16% 2470
chr3 1125218 0.57% 1026
chr4 1437184 0.76% 1179
chr5 2109557 1.16% 1729
chr6 2542651 1.49% 1995
chr7 1977965 1.24% 1548
chr8 1834285 1.26% 1741
chr9 1218104 0.88% 1037
chr10 2475711 1.85% 2300
chr11 1665529 1.23% 1547
chr12 1964839 1.47% 1679
chr13 754865 0.66% 642
chr14 1669624 1.56% 1350
chr15 1411091 1.38% 1347
chr16 1727670 1.91% 1655
chr17 2460079 2.95% 1962
chr18 698726 0.87% 632
chr19 1564200 2.67% 1358
chr20 1532953 2.38% 1453
chr21 554097 1.19% 540
chr22 665452 1.31% 712
chrX 31302058 20.06% 32037
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 64516 220 57052 1060.11 729
global segment-length histogram

Files

Filename Size md5
ENCFF556GWE.bed.gz 1.18 MB 78a26ffcc0d75654180f7abdcec62448
ENCFF556GWE.tabix.bed.gz 626.2 KB 1551e0c18fa017fc07fb39ae3da4f6cf
ENCFF556GWE.tabix.bed.gz.tbi 150.51 KB b5c20e794c42b698a4f04489b62f858a
genomic_resource.yaml 1.78 KB 76057314efffb91eca90e5dc0661f1ca
statistics/