Histone_ChIP-seq_ENCSR910XKX
Histone_ChIP-seq ENCSR910XKX [biosample_summary="Homo sapiens Karpas-422" and target="H3K4me3"]
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| Id: | Histone_ChIP-seq/ENCSR910XKX |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR910XKX [biosamplesummary="Homo sapiens Karpas-422" and target="H3K4me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN664BUM|/analyses/ENCAN664BUM/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF859YTJ|/files/ENCFF859YTJ/} processed by ChIP-seq ENCODE3 GRCh38 pipeline was generated from a library with PBC1 value of 0.90. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR910XKX | float |
Histone_ChIP-seq_ENCSR910XKX |
Histone_ChIP-seq ENCSR910XKX [biosample_summary="Homo sapiens Karpas-422" and target="H3K4me3"]
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[1.42, 45.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF656PHI.bed.gz | 1.0 MB | a7c4e63ee87c120a7e09ebef5dca407b |
| ENCFF656PHI.bed.gz.dvc | 101.0 B | 73f6d7f336db7b754358be18ccca1acb |
| ENCFF656PHI.tabix.bed.gz | 424.55 KB | 623c0f4a2ead43ac9e37302864684223 |
| ENCFF656PHI.tabix.bed.gz.dvc | 106.0 B | 9e86238b0727b2761c6e6e2095aa6f9d |
| ENCFF656PHI.tabix.bed.gz.tbi | 170.72 KB | 36e62b43306f5fd4e5e1162b1b4225ff |
| ENCFF656PHI.tabix.bed.gz.tbi.dvc | 110.0 B | e1609f1a68e4ff78fb5848f2445d9096 |
| genomic_resource.yaml | 2.04 KB | 3a6630467d35c6479e20924cfd875727 |
| genomic_resource_original.yaml | 1.93 KB | f7eb0d279295b08ce723b9175db2ed7e |
| statistics/ |