Resource

Id Histone_ChIP-seq/ENCSR889OUVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR889OUV [biosample_summary="Homo sapiens foreskin fibroblast male newborn" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR889OUV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_1001608/
  • biosample_summary: Homo sapiens foreskin fibroblast male newborn
  • date_created: 2015-09-15T20:26:41.441906+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR889OUV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male newborn
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR889OUV float

Histone_ChIP-seq_ENCSR889OUV
Histone_ChIP-seq ENCSR889OUV [biosample_summary="Homo sapiens foreskin fibroblast male newborn" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR889OUV [1.67, 18.5]
n
197,243,736
mean
6.42
sd
2.85

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1972437366.13% 169782
chr1 19083131 7.67% 16361
chr2 14479572 5.98% 14276
chr3 11625735 5.86% 11267
chr4 6814338 3.58% 7438
chr5 9288206 5.12% 9219
chr6 8399062 4.92% 8424
chr7 9769837 6.13% 8637
chr8 6789361 4.68% 6560
chr9 8933013 6.45% 7364
chr10 8939535 6.68% 8275
chr11 10415545 7.71% 8400
chr12 10991310 8.25% 9011
chr13 3800029 3.32% 4264
chr14 6213131 5.80% 5753
chr15 7357468 7.21% 6999
chr16 9812971 10.86% 6595
chr17 12181580 14.63% 8717
chr18 2944772 3.66% 3210
chr19 12997677 22.17% 6712
chr20 5966148 9.26% 4494
chr21 2087244 4.47% 1684
chr22 5496891 10.82% 3326
chrX 2715301 1.74% 2617
chrY 141879 0.25% 179
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 169782 195 46645 1161.75 700
global segment-length histogram

Files

Filename Size md5
ENCFF865LGR.bed.gz 3.6 MB abeaaff29ce46b00e03d96ec33a876c6
ENCFF865LGR.tabix.bed.gz 1.68 MB d74cbf8f2bbfcc7ef508bcbe0ecce333
ENCFF865LGR.tabix.bed.gz.tbi 194.51 KB d212444207d556eb0472f9a46124d2b2
genomic_resource.yaml 1.46 KB ce7b8ee251bbee1aafac2ef4c8fb1c4a
statistics/