Resource

Id Histone_ChIP-seq/ENCSR888JWScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR888JWS [biosample_summary="Homo sapiens brain tissue male embryo (122 days)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR888JWS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000955/
  • biosample_summary: Homo sapiens brain tissue male embryo (122 days)
  • date_created: 2015-09-15T19:51:52.505189+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR888JWS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (122 days)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR888JWS float

Histone_ChIP-seq_ENCSR888JWS
Histone_ChIP-seq ENCSR888JWS [biosample_summary="Homo sapiens brain tissue male embryo (122 days)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR888JWS [1.97, 15.6]
n
6,516,228
mean
4.16
sd
0.935

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 65162280.20% 19085
chr1 644788 0.26% 1967
chr2 500474 0.21% 1525
chr3 406257 0.20% 1209
chr4 256492 0.13% 786
chr5 326709 0.18% 981
chr6 282528 0.17% 855
chr7 273866 0.17% 818
chr8 209909 0.14% 638
chr9 275231 0.20% 783
chr10 262283 0.20% 787
chr11 335892 0.25% 981
chr12 400268 0.30% 1146
chr13 118153 0.10% 369
chr14 220481 0.21% 657
chr15 251236 0.25% 770
chr16 275296 0.30% 786
chr17 331076 0.40% 987
chr18 103260 0.13% 320
chr19 600406 1.02% 1422
chr20 198281 0.31% 576
chr21 87970 0.19% 256
chr22 130339 0.26% 395
chrX 23729 0.02% 70
chrY 1304 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 19085 185 2155 341.43 296
global segment-length histogram

Files

Filename Size md5
ENCFF139QZN.bed.gz 330.45 KB d9d613b4df9d9ba4bc8c1664a2a2f32b
ENCFF139QZN.tabix.bed.gz 183.55 KB ebf6bc9dd8f4239c4f53cc8a0a99dcba
ENCFF139QZN.tabix.bed.gz.tbi 92.73 KB 4833ee7210383aea3b31f089d6181487
genomic_resource.yaml 2.19 KB e6d5d5ce56f645cea09e60e46931d93b
statistics/