Resource

Id Histone_ChIP-seq/ENCSR886FKDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR886FKD [biosample_summary="Homo sapiens adrenal gland tissue female adult (41 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR886FKD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue female adult (41 years)
  • date_created: 2021-01-28T22:02:13.765386+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR886FKD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR886FKD float

Histone_ChIP-seq_ENCSR886FKD
Histone_ChIP-seq ENCSR886FKD [biosample_summary="Homo sapiens adrenal gland tissue female adult (41 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR886FKD [1.42, 6.11]
n
10,234,929
mean
2.93
sd
0.682

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 102349290.32% 11445
chr1 648785 0.26% 815
chr2 637641 0.26% 857
chr3 502802 0.25% 646
chr4 495351 0.26% 581
chr5 659516 0.36% 738
chr6 394625 0.23% 534
chr7 552654 0.35% 664
chr8 409059 0.28% 517
chr9 395756 0.29% 436
chr10 407285 0.30% 490
chr11 345826 0.26% 465
chr12 539443 0.40% 591
chr13 204912 0.18% 284
chr14 216042 0.20% 306
chr15 260196 0.26% 297
chr16 297919 0.33% 313
chr17 189578 0.23% 222
chr18 192945 0.24% 243
chr19 2183117 3.72% 1485
chr20 121733 0.19% 163
chr21 118399 0.25% 141
chr22 82857 0.16% 114
chrX 378488 0.24% 543
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 11445 223 25147 894.27 668
global segment-length histogram

Files

Filename Size md5
ENCFF816NIJ.bed.gz 240.95 KB aee3bf0bedb4b6bec243b44ab27ea89d
ENCFF816NIJ.tabix.bed.gz 122.63 KB c3e4785dec8d3fec913a5a1655b66a2b
ENCFF816NIJ.tabix.bed.gz.tbi 80.65 KB 8338de673e07afb3e635c5e57c133f33
genomic_resource.yaml 1.51 KB e74c0aee4a98eafe23e14536da4fbac5
statistics/