Resource

Id Histone_ChIP-seq/ENCSR884EVTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR884EVT [biosample_summary="Homo sapiens endocrine pancreas tissue adult (59 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR884EVT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000016/
  • biosample_summary: Homo sapiens endocrine pancreas tissue adult (59 years)
  • date_created: 2015-09-15T20:27:26.371658+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR884EVT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR884EVT float

Histone_ChIP-seq_ENCSR884EVT
Histone_ChIP-seq ENCSR884EVT [biosample_summary="Homo sapiens endocrine pancreas tissue adult (59 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR884EVT [1.76, 21.9]
n
36,437,318
mean
6.82
sd
3.91

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 364373181.13% 66516
chr1 3568513 1.43% 6251
chr2 2640812 1.09% 5016
chr3 2221249 1.12% 4241
chr4 1731966 0.91% 3429
chr5 1838334 1.01% 3555
chr6 2196796 1.29% 4017
chr7 1785780 1.12% 3316
chr8 1546613 1.07% 2998
chr9 1491959 1.08% 2723
chr10 1599699 1.20% 2972
chr11 1913366 1.42% 3382
chr12 1861192 1.40% 3256
chr13 910997 0.80% 1773
chr14 1205931 1.13% 2148
chr15 1178602 1.16% 2045
chr16 1285242 1.42% 2199
chr17 1802970 2.17% 2887
chr18 742690 0.92% 1492
chr19 1809228 3.09% 2793
chr20 947970 1.47% 1632
chr21 345565 0.74% 640
chr22 702652 1.38% 1155
chrX 1109192 0.71% 2596
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 66516 140 6558 547.8 327
global segment-length histogram

Files

Filename Size md5
ENCFF193WRD.bed.gz 1.05 MB 2d56cd01823c6de70e19825d282e3375
ENCFF193WRD.tabix.bed.gz 584.28 KB 767e27d92ac5fe74fcb3fd4994362c0b
ENCFF193WRD.tabix.bed.gz.tbi 322.68 KB 25e72c593b3bc95b16ba50506c44db69
genomic_resource.yaml 1.99 KB e0f4b162fe3719bab36aea9a8b44da3d
statistics/