Resource

Id Histone_ChIP-seq/ENCSR881TWJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR881TWJ [biosample_summary="Homo sapiens PC-3" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR881TWJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002074/
  • biosample_summary: Homo sapiens PC-3
  • date_created: 2014-02-20T05:05:39.305814+00:00
  • date_released: 2016-05-03
  • doi: 10.17989/ENCSR881TWJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR881TWJ float

Histone_ChIP-seq_ENCSR881TWJ
Histone_ChIP-seq ENCSR881TWJ [biosample_summary="Homo sapiens PC-3" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR881TWJ [1.42, 16.5]
n
143,478,580
mean
4.03
sd
1.32

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1434785804.46% 134975
chr1 16378061 6.58% 14523
chr2 12325358 5.09% 11933
chr3 8337130 4.20% 8560
chr4 4507865 2.37% 5028
chr5 7382817 4.07% 7041
chr6 7131388 4.18% 7071
chr7 7107777 4.46% 6998
chr8 9318657 6.42% 8392
chr9 2488179 1.80% 2783
chr10 6625287 4.95% 6093
chr11 10170726 7.53% 9024
chr12 8428557 6.32% 7899
chr13 3479985 3.04% 3501
chr14 7173147 6.70% 6329
chr15 5364918 5.26% 5051
chr16 2346518 2.60% 2478
chr17 4442442 5.34% 3872
chr18 5239629 6.52% 4600
chr19 2233593 3.81% 2176
chr20 8086708 12.55% 6479
chr21 1690963 3.62% 1666
chr22 1172072 2.31% 1171
chrX 2046480 1.31% 2306
chrY 323 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 134975 180 27531 1063 719
global segment-length histogram

Files

Filename Size md5
ENCFF061MHU.bed.gz 2.83 MB 9425a4dbe6db21694d6713ebb4df6ec2
ENCFF061MHU.tabix.bed.gz 1.32 MB 0d7d4916fc15011c0930d1e5394f43db
ENCFF061MHU.tabix.bed.gz.tbi 185.41 KB 7ef85e760abd9adcb41f766a63922f71
genomic_resource.yaml 1.59 KB c5c9412cf2815c691fc32fcb07555753
statistics/