Resource

Id Histone_ChIP-seq/ENCSR881FDYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR881FDY [biosample_summary="Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR881FDY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-08-25T18:07:32.438933+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR881FDY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with Cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR881FDY float

Histone_ChIP-seq_ENCSR881FDY
Histone_ChIP-seq ENCSR881FDY [biosample_summary="Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR881FDY [1.56, 10.5]
n
74,214,784
mean
3.74
sd
1.19

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 742147842.31% 70584
chr1 1914440 0.77% 1857
chr2 1965374 0.81% 1840
chr3 696822 0.35% 688
chr4 1166952 0.61% 1063
chr5 1491821 0.82% 1314
chr6 2039369 1.19% 1604
chr7 1415916 0.89% 1153
chr8 1137121 0.78% 1126
chr9 826884 0.60% 749
chr10 1740050 1.30% 1650
chr11 889009 0.66% 906
chr12 1280225 0.96% 1122
chr13 723542 0.63% 674
chr14 1492004 1.39% 1337
chr15 1321027 1.30% 1298
chr16 1321531 1.46% 1385
chr17 1599483 1.92% 1344
chr18 606824 0.76% 645
chr19 1144801 1.95% 1167
chr20 1115120 1.73% 1140
chr21 604368 1.29% 667
chr22 422058 0.83% 499
chrX 47300043 30.31% 45356
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70584 230 48117 1051.44 754
global segment-length histogram

Files

Filename Size md5
ENCFF166LAY.bed.gz 1.31 MB f608adaaec6867b640e3da1a9e5143fc
ENCFF166LAY.tabix.bed.gz 690.43 KB 2963d1165d7d8c29e05444709433b7f9
ENCFF166LAY.tabix.bed.gz.tbi 124.81 KB bf1351882a1342080f5ac00cf2b0b660
genomic_resource.yaml 1.75 KB f7764d1e8c60c51385e68bb82fce860d
statistics/