Resource

Id Histone_ChIP-seq/ENCSR879TAScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR879TAS [biosample_summary="Homo sapiens H9" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR879TAS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003045/
  • biosample_summary: Homo sapiens H9
  • date_created: 2015-10-01T07:17:26.441446+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR879TAS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR879TAS float

Histone_ChIP-seq_ENCSR879TAS
Histone_ChIP-seq ENCSR879TAS [biosample_summary="Homo sapiens H9" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR879TAS [1.86, 56.2]
n
16,510,937
mean
10.8
sd
7.16

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 165109370.51% 31149
chr1 1671712 0.67% 3090
chr2 1134834 0.47% 2125
chr3 1015289 0.51% 1896
chr4 739087 0.39% 1393
chr5 855818 0.47% 1558
chr6 1094706 0.64% 1997
chr7 782247 0.49% 1523
chr8 584142 0.40% 1133
chr9 606690 0.44% 1192
chr10 632957 0.47% 1216
chr11 860441 0.64% 1586
chr12 911470 0.68% 1662
chr13 353755 0.31% 706
chr14 582561 0.54% 1063
chr15 501556 0.49% 972
chr16 613130 0.68% 1176
chr17 827053 0.99% 1550
chr18 268538 0.33% 525
chr19 1001094 1.71% 1924
chr20 398348 0.62% 748
chr21 135989 0.29% 266
chr22 321193 0.63% 635
chrX 618327 0.40% 1213
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 31149 128 6532 530.06 391
global segment-length histogram

Files

Filename Size md5
ENCFF501NMW.bed.gz 755.24 KB 141f6ff8ab46f90c03b24277fb80ac7b
ENCFF501NMW.tabix.bed.gz 333.12 KB d4b09a17de0fd2cc9dd86444fd8f7673
ENCFF501NMW.tabix.bed.gz.tbi 136.53 KB ce40b7ae8ddf18b40a07850ad87ff052
genomic_resource.yaml 2.08 KB f00c9fcadc2dbcfc7d1a93133fa0a42e
statistics/