Resource

Id Histone_ChIP-seq/ENCSR872PRJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR872PRJ [biosample_summary="Homo sapiens MM.1S" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR872PRJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005724/
  • biosample_summary: Homo sapiens MM.1S
  • date_created: 2014-12-05T21:17:04.948441+00:00
  • date_released: 2016-06-30
  • doi: 10.17989/ENCSR872PRJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR872PRJ float

Histone_ChIP-seq_ENCSR872PRJ
Histone_ChIP-seq ENCSR872PRJ [biosample_summary="Homo sapiens MM.1S" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR872PRJ [1.4, 55.4]
n
39,318,076
mean
12.5
sd
8.31

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 393180761.22% 35675
chr1 3793693 1.52% 3423
chr2 3121067 1.29% 2746
chr3 2495031 1.26% 2240
chr4 1707204 0.90% 1531
chr5 2089843 1.15% 1775
chr6 2428530 1.42% 2103
chr7 1892596 1.19% 1778
chr8 1538923 1.06% 1444
chr9 1491885 1.08% 1426
chr10 1720286 1.29% 1583
chr11 2073475 1.53% 1792
chr12 2121860 1.59% 1842
chr13 684649 0.60% 685
chr14 992717 0.93% 949
chr15 1405058 1.38% 1286
chr16 1421638 1.57% 1335
chr17 2199345 2.64% 1956
chr18 707502 0.88% 659
chr19 1733007 2.96% 1649
chr20 1154891 1.79% 1030
chr21 416473 0.89% 401
chr22 959015 1.89% 875
chrX 1169388 0.75% 1167
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 35675 193 29336 1102.12 815
global segment-length histogram

Files

Filename Size md5
ENCFF524HZB.bed.gz 972.14 KB 4c2ca5c14262b864ff87fabe4aa53236
ENCFF524HZB.tabix.bed.gz 406.28 KB 9c75a992840ed9dc5ff1214ae7628c4c
ENCFF524HZB.tabix.bed.gz.tbi 172.38 KB a908dc5f4ece7b214c124add94c0744f
genomic_resource.yaml 1.58 KB 6375c3aa7471f14cbf90f17362cbf64a
statistics/