Resource

Id Histone_ChIP-seq/ENCSR870NCAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR870NCA [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (84 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR870NCA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue male adult (84 years)
  • date_created: 2021-08-25T18:07:38.608160+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR870NCA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (84 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR870NCA float

Histone_ChIP-seq_ENCSR870NCA
Histone_ChIP-seq ENCSR870NCA [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (84 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR870NCA [1.64, 7.61]
n
5,058,641
mean
4.13
sd
0.983

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 50586410.16% 5944
chr1 347113 0.14% 437
chr2 430333 0.18% 495
chr3 130754 0.07% 163
chr4 277970 0.15% 284
chr5 334125 0.18% 359
chr6 468169 0.27% 544
chr7 389412 0.24% 384
chr8 201367 0.14% 256
chr9 183866 0.13% 218
chr10 312113 0.23% 359
chr11 157119 0.12% 201
chr12 284220 0.21% 300
chr13 124630 0.11% 153
chr14 214309 0.20% 253
chr15 154566 0.15% 193
chr16 165256 0.18% 220
chr17 351161 0.42% 373
chr18 82013 0.10% 101
chr19 137760 0.24% 210
chr20 159199 0.25% 200
chr21 90732 0.19% 144
chr22 39036 0.08% 65
chrX 23418 0.02% 32
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 5944 175 9458 851.05 613
global segment-length histogram

Files

Filename Size md5
ENCFF877AFT.bed.gz 108.06 KB 2a7f7dcb771b2848fa430bec8faea728
ENCFF877AFT.tabix.bed.gz 58.71 KB 3b12421bd9049ccb1895a0b0f48324f4
ENCFF877AFT.tabix.bed.gz.tbi 30.35 KB 7c3a7d060aabfc0e96ffcac3d4ece611
genomic_resource.yaml 1.56 KB 1a07e48551062e90526fb4cfc27587ec
statistics/