Resource

Id Histone_ChIP-seq/ENCSR869GBPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR869GBP [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (53 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR869GBP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue female adult (53 years)
  • date_created: 2016-10-19T23:01:53.486223+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR869GBP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR869GBP float

Histone_ChIP-seq_ENCSR869GBP
Histone_ChIP-seq ENCSR869GBP [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (53 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR869GBP [1.7, 15.6]
n
163,729,562
mean
5.51
sd
2.08

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1637295625.09% 106205
chr1 15955885 6.41% 9889
chr1_KI270711v1_random 2047 4.85% 3
chr2 12762568 5.27% 8856
chr3 10460972 5.28% 7303
chr4 6652569 3.50% 5019
chr5 8228811 4.53% 5428
chr6 7777306 4.55% 5405
chr7 7583598 4.76% 5221
chr8 5701098 3.93% 4169
chr9 6883422 4.97% 4420
chr10 7093080 5.30% 4767
chr11 8288157 6.14% 4953
chr12 9183316 6.89% 5579
chr13 3622119 3.17% 2732
chr14 5898100 5.51% 3793
chr15 6186875 6.07% 4018
chr16 7194142 7.96% 4051
chr17 9200133 11.05% 5251
chr18 2760359 3.43% 2015
chr19 8990346 15.34% 4777
chr20 4962720 7.70% 2872
chr21 1916737 4.10% 1220
chr22 4065393 8.00% 2192
chrUn_GL000195v1 501 0.27% 1
chrUn_GL000219v1 13666 7.63% 20
chrX 2345642 1.50% 2251
3340 contigs with no values (185900196 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 106205 215 67685 1541.64 783
global segment-length histogram

Files

Filename Size md5
ENCFF860DJQ.bed.gz 2.19 MB 9b6e33d587aaa5ba61039405001a3530
ENCFF860DJQ.tabix.bed.gz 1.07 MB 3c3d714bcb804fd3d004c9d347f1e91e
ENCFF860DJQ.tabix.bed.gz.tbi 152.38 KB 78387ddffcb48d5bc0acd0a2b41514b6
genomic_resource.yaml 1.55 KB 5a27ac7e420e2480142d028a071e4661
statistics/