Resource

Id Histone_ChIP-seq/ENCSR867TPPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR867TPP [biosample_summary="Homo sapiens OCI-LY3" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR867TPP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0006710/
  • biosample_summary: Homo sapiens OCI-LY3
  • date_created: 2014-02-20T05:43:01.992981+00:00
  • date_released: 2014-07-11
  • doi: 10.17989/ENCSR867TPP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR867TPP float

Histone_ChIP-seq_ENCSR867TPP
Histone_ChIP-seq ENCSR867TPP [biosample_summary="Homo sapiens OCI-LY3" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR867TPP [1.34, 9.25]
n
101,522,034
mean
3.51
sd
0.911

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1015220343.16% 167259
chr1 10111708 4.06% 15853
chr2 7034605 2.90% 12196
chr3 8080830 4.08% 12730
chr4 3352275 1.76% 5377
chr5 3294723 1.81% 5784
chr6 3709562 2.17% 6209
chr7 4492182 2.82% 7880
chr8 5136332 3.54% 8903
chr9 4998048 3.61% 8707
chr10 2285393 1.71% 4640
chr11 7299329 5.40% 11998
chr12 5576062 4.18% 9125
chr13 2966840 2.59% 4483
chr14 3502370 3.27% 6035
chr15 5136457 5.04% 8004
chr16 3901443 4.32% 7118
chr17 3631449 4.36% 6134
chr18 3121924 3.88% 4627
chr19 2616926 4.46% 4459
chr20 7254999 11.26% 10084
chr21 470390 1.01% 982
chr22 2726645 5.37% 4306
chrX 798609 0.51% 1580
chrY 22933 0.04% 45
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 167259 170 10969 606.98 445
global segment-length histogram

Files

Filename Size md5
ENCFF043JEA.bed.gz 3.43 MB 39fd021ab7911e1676866e3dc9311399
ENCFF043JEA.tabix.bed.gz 1.62 MB 6be756ca6fa0d45bdb2aa35805139c58
ENCFF043JEA.tabix.bed.gz.tbi 266.82 KB 8ab46b73918a04e0f67bba325b25dd33
genomic_resource.yaml 1.86 KB e3ed2ca08015018e6158012cd50798e1
statistics/