Resource

Id Histone_ChIP-seq/ENCSR864OOOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR864OOO [biosample_summary="Homo sapiens right lobe of liver tissue female adult (41 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR864OOO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001114/
  • biosample_summary: Homo sapiens right lobe of liver tissue female adult (41 years)
  • date_created: 2022-05-11T01:55:21.102832+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR864OOO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR864OOO float

Histone_ChIP-seq_ENCSR864OOO
Histone_ChIP-seq ENCSR864OOO [biosample_summary="Homo sapiens right lobe of liver tissue female adult (41 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR864OOO [1.7, 42.6]
n
53,373,753
mean
8.47
sd
5.38

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 533737531.66% 45101
chr1 5327627 2.14% 4422
chr2 3918278 1.62% 3363
chr3 3370391 1.70% 2857
chr4 2117946 1.11% 1838
chr5 2633497 1.45% 2219
chr6 3008788 1.76% 2650
chr7 2468599 1.55% 2159
chr8 2152915 1.48% 1868
chr9 2533471 1.83% 2025
chr10 2686480 2.01% 2206
chr11 2850123 2.11% 2311
chr12 2813972 2.11% 2281
chr13 1155770 1.01% 1020
chr14 1754888 1.64% 1463
chr15 1860475 1.82% 1527
chr16 1977878 2.19% 1751
chr17 2876097 3.45% 2345
chr18 1112109 1.38% 955
chr19 2452375 4.18% 2116
chr20 1444475 2.24% 1213
chr21 652166 1.40% 552
chr22 1349587 2.66% 1109
chrX 855846 0.55% 851
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 45101 230 17691 1183.43 868
global segment-length histogram

Files

Filename Size md5
ENCFF837ELM.bed.gz 1.07 MB f1fc6babd2c883f956d28a8ac2ebad91
ENCFF837ELM.tabix.bed.gz 492.34 KB fd65e6e1d79721552091d5047dd16233
ENCFF837ELM.tabix.bed.gz.tbi 187.42 KB b13c245ae7bc17bd5152be2274486e46
genomic_resource.yaml 1.53 KB 0d9c3e3aef854ca315f301431768341d
statistics/