Resource

Id Histone_ChIP-seq/ENCSR863PSMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR863PSM [biosample_summary="Homo sapiens BLaER1" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR863PSM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1
  • date_created: 2022-01-27T21:50:08.352166+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR863PSM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR863PSM float

Histone_ChIP-seq_ENCSR863PSM
Histone_ChIP-seq ENCSR863PSM [biosample_summary="Homo sapiens BLaER1" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR863PSM [1.41, 26.7]
n
262,380,159
mean
7.65
sd
3.74

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2623801598.16% 209692
chr1 24219277 9.73% 19274
chr1_KI270706v1_random 314 0.18% 1
chr1_KI270713v1_random 8621 21.16% 11
chr1_KI270714v1_random 1288 3.09% 3
chr2 20669157 8.53% 16639
chr3 14393240 7.26% 12507
chr3_GL000221v1_random 4823 3.10% 7
chr4 9870021 5.19% 8727
chr4_GL000008v2_random 927 0.44% 2
chr5 12887981 7.10% 10592
chr5_GL000208v1_random 257 0.28% 1
chr6 13000136 7.61% 11142
chr7 13221866 8.30% 10879
chr8 12038782 8.29% 9472
chr9 11655913 8.42% 9110
chr9_KI270719v1_random 420 0.24% 1
chr9_KI270720v1_random 267 0.68% 1
chr10 13787957 10.31% 10863
chr11 12617751 9.34% 9730
chr11_KI270721v1_random 2924 2.91% 8
chr12 11774298 8.83% 9613
chr13 6077522 5.31% 5401
chr14 8717461 8.14% 6659
chr14_GL000009v2_random 2426 1.20% 3
chr14_GL000194v1_random 2440 1.27% 4
chr14_GL000225v1_random 1985 0.94% 4
chr14_KI270723v1_random 1162 3.05% 2
chr14_KI270724v1_random 343 0.87% 1
chr14_KI270726v1_random 3249 7.43% 6
chr15 8625738 8.46% 7044
chr15_KI270727v1_random 4317 0.96% 7
chr16 11573930 12.81% 8374
chr16_KI270728v1_random 3666 0.20% 5
chr17 14609330 17.55% 10269
chr17_GL000205v2_random 15323 8.26% 15
chr17_KI270729v1_random 1568 0.56% 3
chr18 5429687 6.76% 4616
chr19 10814850 18.45% 8185
chr20 9024799 14.00% 6692
chr21 3993010 8.55% 2972
chr22 8103966 15.95% 5385
chr22_KI270731v1_random 4228 2.80% 8
chr22_KI270733v1_random 3177 1.77% 6
chr22_KI270734v1_random 2012 1.22% 4
chrUn_GL000195v1 2132 1.17% 5
chrUn_GL000214v1 2575 1.87% 3
chrUn_GL000216v2 2849 1.61% 4
chrUn_GL000218v1 451 0.28% 1
chrUn_GL000219v1 12416 6.93% 19
chrUn_GL000220v1 418 0.26% 1
chrUn_GL000224v1 804 0.45% 1
chrUn_KI270438v1 1635 1.45% 4
chrUn_KI270442v1 1735 0.44% 2
chrUn_KI270512v1 365 1.61% 1
chrUn_KI270516v1 523 40.23% 1
chrUn_KI270519v1 2655 1.92% 1
chrUn_KI270584v1 283 6.27% 1
chrUn_KI270742v1 277 0.15% 1
chrUn_KI270744v1 6482 3.85% 7
chrUn_KI270751v1 1812 1.20% 2
chrUn_KI270753v1 2765 4.39% 2
chrUn_KI270755v1 444 1.21% 1
chrX 5160606 3.31% 5377
chrY 6523 0.01% 10
3302 contigs with no values (121580913 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 209692 250 51472 1251.26 750
global segment-length histogram

Files

Filename Size md5
ENCFF426IYK.bed.gz 4.48 MB ea4daf105e17228539c8fa9e3ebc9d3a
ENCFF426IYK.tabix.bed.gz 2.09 MB d8eadef6cb16eae1ce380edcb411ce3a
ENCFF426IYK.tabix.bed.gz.tbi 436.98 KB 3a0d6462c7b84c328d09c3a375f99511
genomic_resource.yaml 2.56 KB 13638b758213d0ec84e39f29348a64b2
statistics/