Resource

Id Histone_ChIP-seq/ENCSR860TEJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR860TEJ [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR860TEJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-04-30T04:18:00.018109+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR860TEJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR860TEJ float

Histone_ChIP-seq_ENCSR860TEJ
Histone_ChIP-seq ENCSR860TEJ [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR860TEJ [1.45, 31.9]
n
33,104,335
mean
7.5
sd
3.87

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 331043351.03% 35319
chr1 3433571 1.38% 3610
chr2 2437766 1.01% 2541
chr3 1936387 0.98% 2148
chr4 1328816 0.70% 1464
chr5 1704973 0.94% 1791
chr6 1814761 1.06% 1874
chr7 1478029 0.93% 1654
chr8 1236973 0.85% 1421
chr9 1624729 1.17% 1649
chr10 1777971 1.33% 1784
chr11 2025057 1.50% 2029
chr12 1599938 1.20% 1776
chr13 787796 0.69% 857
chr14 1203828 1.12% 1246
chr15 1151251 1.13% 1249
chr16 1145530 1.27% 1262
chr17 1851729 2.22% 1945
chr18 617849 0.77% 660
chr19 1452933 2.48% 1623
chr20 884361 1.37% 935
chr21 367011 0.79% 398
chr22 745829 1.47% 731
chrX 497247 0.32% 672
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 35319 175 19858 937.3 621
global segment-length histogram

Files

Filename Size md5
ENCFF681YKY.bed.gz 770.48 KB f17a668bf5458304a4669dcfc34bfdb5
ENCFF681YKY.tabix.bed.gz 368.35 KB 9081c16c52c327d7b50cee4510fea892
ENCFF681YKY.tabix.bed.gz.tbi 154.91 KB 81fc1dd0c3d76380c06d63fbe5c688ad
genomic_resource.yaml 1.61 KB 73d52ec05d39bef53f7c570e033d05f0
statistics/