Resource

Id Histone_ChIP-seq/ENCSR859FGWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR859FGW [biosample_summary="Homo sapiens DOHH2" and target="H2AFZ"]
Description
Labels
  • accession: ENCSR859FGW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002167/
  • biosample_summary: Homo sapiens DOHH2
  • date_created: 2014-02-20T05:43:22.828194+00:00
  • date_released: 2016-10-07
  • doi: 10.17989/ENCSR859FGW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H2AFZ

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR859FGW float

Histone_ChIP-seq_ENCSR859FGW

Histone_ChIP-seq ENCSR859FGW [biosample_summary="Homo sapiens DOHH2" and target="H2AFZ"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR859FGW [1.62, 42.2]
n
67,558,454
mean
7.44
sd
4.23

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 675584542.10% 83283
chr1 6082216 2.44% 7306
chr1_KI270713v1_random 221 0.54% 1
chr2 6544281 2.70% 8255
chr3 4937530 2.49% 6191
chr4 3541386 1.86% 4607
chr5 3796668 2.09% 4690
chr6 4446349 2.60% 5355
chr7 3992908 2.51% 4936
chr8 2750221 1.89% 3404
chr9 2120773 1.53% 2609
chr10 3062277 2.29% 3666
chr11 3076555 2.28% 3619
chr12 4022032 3.02% 4915
chr13 2011235 1.76% 2583
chr14 2209339 2.06% 2654
chr15 1925634 1.89% 2172
chr16 1920487 2.13% 2486
chr17 2462030 2.96% 3017
chr17_GL000205v2_random 3558 1.92% 3
chr18 1394662 1.74% 1789
chr19 2207335 3.77% 2761
chr20 1478110 2.29% 1790
chr21 717961 1.54% 917
chr22 1181456 2.32% 1496
chrUn_GL000195v1 274 0.15% 1
chrUn_GL000219v1 6580 3.67% 7
chrX 1600063 1.03% 1978
chrY 66313 0.12% 75
3338 contigs with no values (128488655 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 83283 205 7384 811.19 629
global segment-length histogram

Files

Filename Size md5
ENCFF704PLX.bed.gz 2.02 MB d25a53d92ee279cf36ca016bf3d78e72
ENCFF704PLX.tabix.bed.gz 902.12 KB 782e8e2c033d33177f135fe92215e7dc
ENCFF704PLX.tabix.bed.gz.tbi 264.64 KB eabd04b0e9538ccd6982a09f704f9a69
genomic_resource.yaml 1.36 KB 197febf47b5f2700580996cd7aaf04b5
statistics/