Histone_ChIP-seq_ENCSR857LLS
Histone_ChIP-seq ENCSR857LLS [biosample_summary="Homo sapiens iPS DF 6.9" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR857LLS |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR857LLS [biosamplesummary="Homo sapiens iPS DF 6.9" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN160XTQ|/analyses/ENCAN160XTQ/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN160XTQ|/analyses/ENCAN160XTQ/} has in progress subobject document {06bfefcf-b986-4516-8eda-36a5396839d3|/documents/06bfefcf-b986-4516-8eda-36a5396839d3/} audit_not_compliant: Processed alignments file {ENCFF282WZN|/files/ENCFF282WZN/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 21496938 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF826HOA|/files/ENCFF826HOA/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 32235912 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR857LLS | float |
Histone_ChIP-seq_ENCSR857LLS |
Histone_ChIP-seq ENCSR857LLS [biosample_summary="Homo sapiens iPS DF 6.9" and target="H3K4me1"]
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[1.68, 13] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF211VYM.bed.gz | 1.65 MB | ed6f5d08a0a51e1ddbf321cadc906daa |
| ENCFF211VYM.bed.gz.dvc | 101.0 B | 7e5c355b8c412a59c6e5f4b5a9f236ff |
| ENCFF211VYM.tabix.bed.gz | 835.59 KB | 7c8f55fbb2c8bd8f3e368353acab8170 |
| ENCFF211VYM.tabix.bed.gz.dvc | 106.0 B | 77ef66b70ce021d2580fc10da1bcb330 |
| ENCFF211VYM.tabix.bed.gz.tbi | 337.3 KB | f3f3a8634060fd69732a85c1191aa84e |
| ENCFF211VYM.tabix.bed.gz.tbi.dvc | 110.0 B | 9014ec3ce1c842900f44b9c4fddc9543 |
| genomic_resource.yaml | 2.62 KB | b2e21dab3670ebcb9d6c0caa2c5364b6 |
| genomic_resource_original.yaml | 2.51 KB | 9e2d42b35b8f5654885e2b031ca6dbd5 |
| statistics/ |