Resource

Id Histone_ChIP-seq/ENCSR855NCGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR855NCG [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (83 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR855NCG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (83 years)
  • date_created: 2021-01-28T04:11:02.025431+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR855NCG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (83 years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR855NCG float

Histone_ChIP-seq_ENCSR855NCG
Histone_ChIP-seq ENCSR855NCG [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (83 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR855NCG [1.8, 59.4]
n
107,187,386
mean
9.52
sd
7.02

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1071873863.33% 71974
chr1 10669278 4.29% 7011
chr2 7929910 3.27% 5500
chr3 6606484 3.33% 4507
chr4 4464113 2.35% 3064
chr5 5878069 3.24% 4036
chr6 5684097 3.33% 3766
chr7 4922481 3.09% 3508
chr8 4485052 3.09% 3108
chr9 5108263 3.69% 3252
chr10 5667419 4.24% 3614
chr11 6455183 4.78% 4142
chr12 5561126 4.17% 3847
chr13 2614663 2.29% 1765
chr14 3622417 3.38% 2393
chr15 3719594 3.65% 2458
chr16 3537946 3.92% 2438
chr17 5795084 6.96% 3696
chr18 2208559 2.75% 1503
chr19 4150669 7.08% 2865
chr20 3006828 4.67% 1965
chr21 1149157 2.46% 791
chr22 2401276 4.73% 1577
chrX 1549718 0.99% 1168
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 71974 240 64541 1489.25 984
global segment-length histogram

Files

Filename Size md5
ENCFF872ZJD.bed.gz 1.56 MB aad1ad4b7b4b3691b60f53de413946b0
ENCFF872ZJD.tabix.bed.gz 754.82 KB 56a7c5e4601d50323cdb86cfb37b8190
ENCFF872ZJD.tabix.bed.gz.tbi 239.88 KB 5b8485330f91870428cec15062a5d545
genomic_resource.yaml 1.72 KB 49f593d84eb2efac9aaf91fb05160694
statistics/