Resource

Id Histone_ChIP-seq/ENCSR853JYBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR853JYB [biosample_summary="Homo sapiens liver tissue female adult (25 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR853JYB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002107/
  • biosample_summary: Homo sapiens liver tissue female adult (25 years)
  • date_created: 2015-09-15T19:52:17.001501+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR853JYB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (25 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR853JYB float

Histone_ChIP-seq_ENCSR853JYB
Histone_ChIP-seq ENCSR853JYB [biosample_summary="Homo sapiens liver tissue female adult (25 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR853JYB [1.68, 19.1]
n
15,910,317
mean
5.41
sd
1.92

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 159103170.49% 44873
chr1 826640 0.33% 2483
chr2 921961 0.38% 2843
chr3 750004 0.38% 2301
chr4 894697 0.47% 2838
chr5 1052173 0.58% 3025
chr6 611256 0.36% 1939
chr7 957695 0.60% 2772
chr8 679948 0.47% 2072
chr9 481571 0.35% 1398
chr10 736027 0.55% 1965
chr11 550247 0.41% 1761
chr12 719252 0.54% 2041
chr13 349871 0.31% 1179
chr14 310448 0.29% 1045
chr15 362917 0.36% 965
chr16 614439 0.68% 1616
chr17 252099 0.30% 742
chr18 300551 0.37% 960
chr19 2706602 4.62% 5404
chr20 288526 0.45% 795
chr21 238773 0.51% 531
chr22 122310 0.24% 348
chrX 1161630 0.74% 3809
chrY 20680 0.04% 41
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 44873 155 21326 354.56 274
global segment-length histogram

Files

Filename Size md5
ENCFF323VPE.bed.gz 776.34 KB 235f03cfb534ad1cab7275e222f27142
ENCFF323VPE.tabix.bed.gz 405.74 KB ada182ea079af261af85959fdc3e61ca
ENCFF323VPE.tabix.bed.gz.tbi 217.03 KB 2b5df3e0ff92525df5e3a484a703d6b5
genomic_resource.yaml 1.98 KB d15141a747a26858a53ce1ffebcc8f42
statistics/