Resource

Id Histone_ChIP-seq/ENCSR845BEGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR845BEG [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue female adult (51 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR845BEG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004648/
  • biosample_summary: Homo sapiens esophagus muscularis mucosa tissue female adult (51 years)
  • date_created: 2018-05-11T18:45:15.047102+00:00
  • date_released: 2018-12-19
  • doi: 10.17989/ENCSR845BEG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR845BEG float

Histone_ChIP-seq_ENCSR845BEG
Histone_ChIP-seq ENCSR845BEG [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue female adult (51 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR845BEG [1.61, 13]
n
123,626,543
mean
4.88
sd
1.74

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1236265433.84% 79844
chr1 12421056 4.99% 7655
chr1_KI270711v1_random 1268 3.00% 1
chr2 8906906 3.68% 6524
chr3 7423927 3.74% 5262
chr4 4415132 2.32% 3548
chr5 5586220 3.08% 3955
chr6 5134258 3.01% 3620
chr7 5602686 3.52% 3737
chr8 3799738 2.62% 2874
chr9 5861729 4.24% 3636
chr10 5483277 4.10% 3727
chr11 6542473 4.84% 3889
chr12 7052948 5.29% 4213
chr13 2216393 1.94% 1834
chr14 4217655 3.94% 2910
chr15 4652363 4.56% 3178
chr16 6238806 6.91% 3192
chr17 7588151 9.11% 4254
chr17_GL000205v2_random 765 0.41% 1
chr18 1799858 2.24% 1501
chr19 8187349 13.97% 3942
chr20 3932042 6.10% 2359
chr21 1500356 3.21% 949
chr22 3570530 7.03% 1804
chrUn_GL000195v1 521 0.28% 1
chrUn_GL000219v1 3635 2.03% 5
chrX 1486501 0.95% 1273
3339 contigs with no values (185714605 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 79844 245 42046 1548.35 981
global segment-length histogram

Files

Filename Size md5
ENCFF487VTD.bed.gz 1.72 MB 53a34fba756983f89084a68a6b844110
ENCFF487VTD.tabix.bed.gz 836.16 KB 446f146b981464a5aa0cb004a4de99eb
ENCFF487VTD.tabix.bed.gz.tbi 147.34 KB 9ae1b40c8449845e0b888eb75fde3d1a
genomic_resource.yaml 1.56 KB da9ae994bbe2a97191c25dba4535d249
statistics/