Resource

Id Histone_ChIP-seq/ENCSR841AJOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR841AJO [biosample_summary="Homo sapiens prostate gland tissue male adult (37 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR841AJO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002367/
  • biosample_summary: Homo sapiens prostate gland tissue male adult (37 years)
  • date_created: 2019-07-29T21:01:26.122371+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR841AJO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR841AJO float

Histone_ChIP-seq_ENCSR841AJO
Histone_ChIP-seq ENCSR841AJO [biosample_summary="Homo sapiens prostate gland tissue male adult (37 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR841AJO [1.13, 56.2]
n
92,528,233
mean
10
sd
8.29

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 925282332.88% 55020
chr1 9418907 3.78% 5420
chr2 6665524 2.75% 4160
chr3 5638869 2.84% 3360
chr4 3678852 1.93% 2258
chr5 4425473 2.44% 2795
chr6 4861777 2.85% 2954
chr7 3975447 2.49% 2534
chr8 3534099 2.43% 2219
chr9 4016016 2.90% 2412
chr10 4452203 3.33% 2695
chr11 4827680 3.57% 2752
chr12 4633150 3.48% 2693
chr13 2051899 1.79% 1285
chr14 3077072 2.87% 1793
chr15 3506959 3.44% 2090
chr16 3607001 3.99% 2170
chr17 5429505 6.52% 2937
chr18 1829286 2.28% 1124
chr19 4576680 7.81% 2413
chr20 2672371 4.15% 1619
chr21 1497680 3.21% 818
chr22 2613741 5.14% 1406
chrX 1480306 0.95% 1070
chrY 57736 0.10% 43
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 55020 255 54337 1681.72 1147
global segment-length histogram

Files

Filename Size md5
ENCFF002NFG.bed.gz 1.39 MB 655d38cdef5d6574b72d6db94bb754c0
ENCFF002NFG.tabix.bed.gz 619.24 KB f5272124084046b21b5f5da39b30bf66
ENCFF002NFG.tabix.bed.gz.tbi 209.83 KB 01dafd15599d4869bba95c9dd44ab7b3
genomic_resource.yaml 1.5 KB 085e6edb6668db76ecaec1c86f2a1672
statistics/