Resource

Id Histone_ChIP-seq/ENCSR839YFScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR839YFS [biosample_summary="Homo sapiens BLaER1" and target="H4K20me1"]
Description
Labels
  • accession: ENCSR839YFS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1
  • date_created: 2022-01-27T21:50:54.837926+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR839YFS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H4K20me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR839YFS float

Histone_ChIP-seq_ENCSR839YFS
Histone_ChIP-seq ENCSR839YFS [biosample_summary="Homo sapiens BLaER1" and target="H4K20me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR839YFS [1.15, 35.9]
n
162,651,928
mean
7.42
sd
5.21

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1626519285.06% 135657
chr1 15175470 6.10% 12879
chr1_KI270712v1_random 1783 1.01% 5
chr1_KI270713v1_random 1508 3.70% 4
chr2 11879314 4.90% 9969
chr3 9153425 4.62% 8117
chr4 5639368 2.96% 5055
chr5 8014961 4.42% 6656
chr6 7878311 4.61% 6410
chr7 8798488 5.52% 7912
chr8 7939621 5.47% 5858
chr9 7289167 5.27% 5828
chr10 8427456 6.30% 7423
chr11 7577847 5.61% 6361
chr12 7532553 5.65% 6466
chr13 3295640 2.88% 2923
chr14 5004820 4.68% 4333
chr14_GL000194v1_random 2049 1.07% 3
chr15 5033944 4.94% 4542
chr16 7794440 8.63% 5908
chr17 9652007 11.59% 7816
chr18 3138142 3.90% 2698
chr19 7697849 13.13% 5476
chr20 4923959 7.64% 3740
chr21 2038531 4.36% 1567
chr22 5163055 10.16% 3731
chrUn_GL000219v1 5973 3.33% 7
chrUn_KI270303v1 558 28.73% 1
chrUn_KI270304v1 401 18.52% 1
chrUn_KI270310v1 780 64.95% 2
chrUn_KI270411v1 2135 80.69% 2
chrUn_KI270412v1 281 23.83% 1
chrUn_KI270418v1 295 13.75% 1
chrUn_KI270422v1 476 32.94% 1
chrUn_KI270438v1 2693 2.39% 5
chrUn_KI270465v1 681 38.39% 1
chrUn_KI270512v1 320 1.41% 1
chrUn_KI270544v1 1004 83.53% 2
chrX 3580129 2.29% 3947
chrY 2494 <0.01% 5
3327 contigs with no values (128338737 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 135657 250 202149 1198.99 488
global segment-length histogram

Files

Filename Size md5
ENCFF877MCY.bed.gz 2.59 MB c074ceeb7b15f931e69ea7d9a454d449
ENCFF877MCY.tabix.bed.gz 1.28 MB bf907852305c6cfd3f83360cbd912669
ENCFF877MCY.tabix.bed.gz.tbi 170.44 KB 5cbb10011764d76ff4416370e50fb038
genomic_resource.yaml 2.56 KB 34aeebc2521478bab93c3ec7c12aec6a
statistics/