Resource

Id Histone_ChIP-seq/ENCSR839ICQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR839ICQ [biosample_summary="Homo sapiens placenta tissue female embryo (113 days)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR839ICQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001987/
  • biosample_summary: Homo sapiens placenta tissue female embryo (113 days)
  • date_created: 2015-09-16T21:42:41.912056+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR839ICQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (113 days)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR839ICQ float

Histone_ChIP-seq_ENCSR839ICQ
Histone_ChIP-seq ENCSR839ICQ [biosample_summary="Homo sapiens placenta tissue female embryo (113 days)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR839ICQ [1.92, 18.8]
n
27,856,637
mean
5.85
sd
2.16

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 278566370.87% 56895
chr1 2685748 1.08% 5635
chr1_KI270709v1_random 1931 2.89% 1
chr1_KI270713v1_random 347 0.85% 1
chr2 1891526 0.78% 3819
chr3 843823 0.43% 1854
chr4 1080929 0.57% 1943
chr5 1173878 0.65% 2345
chr6 1129757 0.66% 2398
chr7 1402781 0.88% 2729
chr8 948286 0.65% 2011
chr9 1439694 1.04% 2791
chr10 1452410 1.09% 2993
chr11 1735177 1.28% 3610
chr12 1207279 0.91% 2338
chr13 507421 0.44% 1052
chr14 780951 0.73% 1613
chr15 627015 0.61% 1403
chr16 1264114 1.40% 2436
chr17 1814915 2.18% 3618
chr17_GL000205v2_random 3725 2.01% 3
chr17_KI270729v1_random 1607 0.57% 2
chr18 394854 0.49% 890
chr19 1592282 2.72% 3002
chr20 1335580 2.07% 2690
chr21 404807 0.87% 828
chr22 804484 1.58% 1732
chr22_KI270732v1_random 1368 3.29% 2
chr22_KI270733v1_random 333 0.19% 1
chr22_KI270735v1_random 409 0.96% 1
chrUn_KI270749v1 883 0.56% 2
chrX 1328323 0.85% 3152
3335 contigs with no values (185307580 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 56895 185 8231 489.61 368
global segment-length histogram

Files

Filename Size md5
ENCFF621XBN.bed.gz 1.02 MB 69ac7a9e107d54643ed17ddf569ade0c
ENCFF621XBN.tabix.bed.gz 539.13 KB 976d3ce62fec30f2202cda4620202f90
ENCFF621XBN.tabix.bed.gz.tbi 161.0 KB 7ce00b95c7bb864de61b81369aa7225f
genomic_resource.yaml 1.99 KB 7b647b0f577cbaac07e75ac72a4f6e8d
statistics/