Histone_ChIP-seq_ENCSR837SUQ
Histone_ChIP-seq ENCSR837SUQ [biosample_summary="Homo sapiens Loucy" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR837SUQ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR837SUQ [biosamplesummary="Homo sapiens Loucy" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN970RPZ|/analyses/ENCAN970RPZ/} has in progress subobject document {e6b627b0-c5ae-4724-b008-eab3e0e7d74b|/documents/e6b627b0-c5ae-4724-b008-eab3e0e7d74b/} audit_internal_action: Released analysis {ENCAN970RPZ|/analyses/ENCAN970RPZ/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF765KXV|/files/ENCFF765KXV/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 25714064 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF949KBQ|/files/ENCFF949KBQ/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 15901773 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR837SUQ | float |
Histone_ChIP-seq_ENCSR837SUQ |
Histone_ChIP-seq ENCSR837SUQ [biosample_summary="Homo sapiens Loucy" and target="H3K36me3"]
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[1.85, 21.4] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF792HIB.bed.gz | 2.5 MB | 936aa4d63c522af23feb8a08617669aa |
| ENCFF792HIB.bed.gz.dvc | 101.0 B | a320978d39bea988da2c3c4f20bba6a7 |
| ENCFF792HIB.tabix.bed.gz | 1.14 MB | 825aa45b859db2ac4b2dc3a77d43d57b |
| ENCFF792HIB.tabix.bed.gz.dvc | 107.0 B | 022cf50f30dc036ede729efa8eaea33f |
| ENCFF792HIB.tabix.bed.gz.tbi | 143.58 KB | 56b909a5361f7bc9ede568e779606168 |
| ENCFF792HIB.tabix.bed.gz.tbi.dvc | 110.0 B | 17e1d7697d60d683db4d20dbc92eb0f0 |
| genomic_resource.yaml | 2.61 KB | 56bb2a9ca7cfd30a3197015fb728a9d7 |
| genomic_resource_original.yaml | 2.5 KB | ea16c773e5578aabc9973ac9130b77a4 |
| statistics/ |