Resource

Id Histone_ChIP-seq/ENCSR837DVFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR837DVF [biosample_summary="Homo sapiens lower lobe of right lung tissue male adult (60 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR837DVF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002171/
  • biosample_summary: Homo sapiens lower lobe of right lung tissue male adult (60 years)
  • date_created: 2022-05-11T01:55:14.322736+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR837DVF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR837DVF float

Histone_ChIP-seq_ENCSR837DVF
Histone_ChIP-seq ENCSR837DVF [biosample_summary="Homo sapiens lower lobe of right lung tissue male adult (60 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR837DVF [1.88, 79.1]
n
85,250,005
mean
13
sd
11.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 852500052.65% 61640
chr1 8659692 3.48% 6123
chr2 6310163 2.61% 4694
chr3 5302770 2.67% 3878
chr4 2820431 1.48% 2175
chr5 3870924 2.13% 2861
chr6 4533313 2.65% 3320
chr7 3686109 2.31% 2794
chr8 3120181 2.15% 2477
chr9 3844840 2.78% 2786
chr10 4247695 3.17% 3061
chr11 4654397 3.45% 3290
chr12 4455027 3.34% 3064
chr13 1709385 1.49% 1331
chr14 2878505 2.69% 2049
chr15 2979930 2.92% 2101
chr16 3528512 3.91% 2516
chr17 5428363 6.52% 3581
chr18 1443528 1.80% 1174
chr19 4361980 7.44% 2935
chr20 2553608 3.96% 1820
chr21 1013497 2.17% 804
chr22 2330748 4.59% 1585
chrX 1478983 0.95% 1198
chrY 37424 0.07% 23
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 61640 230 30177 1383.03 974
global segment-length histogram

Files

Filename Size md5
ENCFF299FWI.bed.gz 1.43 MB e14b5676229300a284a8f84007f75d02
ENCFF299FWI.tabix.bed.gz 665.15 KB f94e23f3597d2a4275e5b86a3ed2bef7
ENCFF299FWI.tabix.bed.gz.tbi 219.45 KB 9627a8becc50ec7858e635ab506b605e
genomic_resource.yaml 1.54 KB 9886e3ea7f28b7e263db462da22d5634
statistics/