Resource

Id Histone_ChIP-seq/ENCSR832EJXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR832EJX [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (86 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR832EJX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (86 years)
  • date_created: 2021-08-25T18:07:29.509549+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR832EJX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (86 years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR832EJX float

Histone_ChIP-seq_ENCSR832EJX
Histone_ChIP-seq ENCSR832EJX [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (86 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR832EJX [1.65, 13.8]
n
85,204,433
mean
4.37
sd
1.79

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 852044332.65% 75550
chr1 2855586 1.15% 2764
chr2 2604398 1.08% 2423
chr3 976432 0.49% 929
chr4 1371657 0.72% 1149
chr5 1970803 1.09% 1676
chr6 2459684 1.44% 1859
chr7 1841691 1.16% 1507
chr8 1548555 1.07% 1503
chr9 1183482 0.86% 1044
chr10 2252542 1.68% 2148
chr11 1322000 0.98% 1281
chr12 1748388 1.31% 1532
chr13 858810 0.75% 736
chr14 1653058 1.54% 1512
chr15 1372081 1.35% 1392
chr16 1794139 1.99% 1779
chr17 2050559 2.46% 1654
chr18 781083 0.97% 820
chr19 1771603 3.02% 1684
chr20 1621563 2.52% 1622
chr21 741564 1.59% 751
chr22 779610 1.53% 851
chrX 49645145 31.82% 42934
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 75550 230 55959 1127.79 790
global segment-length histogram

Files

Filename Size md5
ENCFF689TKU.bed.gz 1.38 MB dc64c3c7ac2cb2bbadb11ee4e23d8bf9
ENCFF689TKU.tabix.bed.gz 727.73 KB 62c2608794f0257b27c9608f26453430
ENCFF689TKU.tabix.bed.gz.tbi 144.95 KB 1da90872699e3437a9a48b77387a39ad
genomic_resource.yaml 1.71 KB b1e55b29ea1c45c854325af43a11be8c
statistics/