Resource

Id Histone_ChIP-seq/ENCSR831LTXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR831LTX [biosample_summary="Homo sapiens colonic mucosa tissue female adult (56 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR831LTX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000317/
  • biosample_summary: Homo sapiens colonic mucosa tissue female adult (56 years)
  • date_created: 2015-09-15T19:51:44.413022+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR831LTX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (56 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR831LTX float

Histone_ChIP-seq_ENCSR831LTX
Histone_ChIP-seq ENCSR831LTX [biosample_summary="Homo sapiens colonic mucosa tissue female adult (56 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR831LTX [1.98, 9.02]
n
5,515,780
mean
4.44
sd
1.02

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 55157800.17% 11006
chr1 546887 0.22% 1078
chr2 414905 0.17% 754
chr3 216444 0.11% 431
chr4 175670 0.09% 327
chr5 266215 0.15% 500
chr6 280311 0.16% 538
chr7 232765 0.15% 455
chr8 174345 0.12% 364
chr9 283065 0.20% 517
chr10 308585 0.23% 578
chr11 279051 0.21% 565
chr12 284447 0.21% 537
chr13 111164 0.10% 203
chr14 135961 0.13% 271
chr15 168009 0.16% 334
chr16 126838 0.14% 265
chr17 346322 0.42% 677
chr18 59803 0.07% 127
chr19 241295 0.41% 490
chr20 223627 0.35% 461
chr21 59945 0.13% 118
chr22 127728 0.25% 267
chrX 452398 0.29% 1149
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 11006 235 3382 501.16 415
global segment-length histogram

Files

Filename Size md5
ENCFF872BJB.bed.gz 192.68 KB 6cd3f9cb85176882fbf202673bf71e36
ENCFF872BJB.tabix.bed.gz 106.69 KB 88b3c8a1281dee695f64379a7dcef357
ENCFF872BJB.tabix.bed.gz.tbi 60.7 KB 4f322017ce8b5567039430e03e51f6a4
genomic_resource.yaml 2.01 KB 98057e7460a484d0f96f698f2204becf
statistics/