Histone_ChIP-seq_ENCSR831JSP
Histone_ChIP-seq ENCSR831JSP [biosample_summary="Homo sapiens IMR-90" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR831JSP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR831JSP [biosamplesummary="Homo sapiens IMR-90" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN354IXC|/analyses/ENCAN354IXC/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF064SDE|/files/ENCFF064SDE/} processed by ChIP-seq ENCODE3 hg19 pipeline has 23680245 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF307BHB|/files/ENCFF307BHB/} processed by ChIP-seq ENCODE3 hg19 pipeline has 20081696 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR831JSP | float |
Histone_ChIP-seq_ENCSR831JSP |
Histone_ChIP-seq ENCSR831JSP [biosample_summary="Homo sapiens IMR-90" and target="H3K4me1"]
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[1.54, 14] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF830JTY.bed.gz | 4.12 MB | 6db8b258b4bf54bf7a4a28f16761af9c |
| ENCFF830JTY.bed.gz.dvc | 101.0 B | 874a0b43cae89152095005fb1d2b327a |
| ENCFF830JTY.tabix.bed.gz | 1.83 MB | c9fbd15ebda2d15db7a499ee3b3f6cb8 |
| ENCFF830JTY.tabix.bed.gz.dvc | 107.0 B | 1eb7a2bb983680ffce83a099e02964a5 |
| ENCFF830JTY.tabix.bed.gz.tbi | 393.36 KB | 59a5afd7bd74413f1a004506c88ececc |
| ENCFF830JTY.tabix.bed.gz.tbi.dvc | 110.0 B | a9df2534b8a72e1bdfbd6fcb59323c88 |
| genomic_resource.yaml | 2.37 KB | 97fdce06521e0757953ae27bfe613c8f |
| genomic_resource_original.yaml | 2.26 KB | a9e2d1e949c7f93fd7de48573ba62e8c |
| statistics/ |