Resource

Id Histone_ChIP-seq/ENCSR830HUEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR830HUE [biosample_summary="Homo sapiens mucosa of rectum tissue female adult (61 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR830HUE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0003346/
  • biosample_summary: Homo sapiens mucosa of rectum tissue female adult (61 years)
  • date_created: 2015-09-15T19:52:29.997315+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR830HUE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (61 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR830HUE float

Histone_ChIP-seq_ENCSR830HUE
Histone_ChIP-seq ENCSR830HUE [biosample_summary="Homo sapiens mucosa of rectum tissue female adult (61 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR830HUE [1.68, 13.6]
n
8,093,187
mean
4.67
sd
1.44

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 80931870.25% 17588
chr1 402214 0.16% 890
chr2 396617 0.16% 940
chr3 368987 0.19% 903
chr4 418801 0.22% 974
chr5 501089 0.28% 1198
chr6 264819 0.16% 670
chr7 446894 0.28% 1016
chr8 368049 0.25% 916
chr9 236103 0.17% 549
chr10 286402 0.21% 670
chr11 234393 0.17% 606
chr12 358834 0.27% 738
chr13 219994 0.19% 592
chr14 240099 0.22% 641
chr15 231068 0.23% 516
chr16 368507 0.41% 713
chr17 156145 0.19% 328
chr18 156167 0.19% 400
chr19 1826009 3.12% 2834
chr20 92862 0.14% 220
chr21 202646 0.43% 475
chr22 64160 0.13% 156
chrX 251748 0.16% 641
chrY 580 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 17588 160 8833 460.15 365
global segment-length histogram

Files

Filename Size md5
ENCFF730XFG.bed.gz 323.4 KB dbeb5f07b632054ec44cf9cf415828b7
ENCFF730XFG.tabix.bed.gz 169.29 KB 66c9c245c2dddf80f5b29966f42ec0a1
ENCFF730XFG.tabix.bed.gz.tbi 100.31 KB 0ce0f41b38afe380a809aff17937836a
genomic_resource.yaml 1.52 KB 04bcecede3007aa2ac6e1476cc6587ca
statistics/