Resource

Id Histone_ChIP-seq/ENCSR830EXCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR830EXC [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (74 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR830EXC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (74 years)
  • date_created: 2021-01-28T04:10:43.402484+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR830EXC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (74 years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR830EXC float

Histone_ChIP-seq_ENCSR830EXC
Histone_ChIP-seq ENCSR830EXC [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (74 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR830EXC [1.7, 61.6]
n
155,847,387
mean
10.6
sd
8.01

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1558473874.84% 80906
chr1 15681326 6.30% 7767
chr2 11490062 4.74% 6267
chr3 9485384 4.78% 5120
chr4 6609495 3.47% 3518
chr5 8479613 4.67% 4550
chr6 8340648 4.88% 4420
chr7 7329095 4.60% 4091
chr8 6168401 4.25% 3359
chr9 7596455 5.49% 3701
chr10 8238998 6.16% 4153
chr11 9420048 6.97% 4546
chr12 7714898 5.79% 4164
chr13 3726773 3.26% 1986
chr14 5382948 5.03% 2719
chr15 5541404 5.43% 2820
chr16 5234289 5.79% 2740
chr17 8548506 10.27% 4090
chr18 3115754 3.88% 1728
chr19 5856057 9.99% 2957
chr20 4283159 6.65% 2172
chr21 1684659 3.61% 905
chr22 3588173 7.06% 1766
chrX 2331242 1.49% 1367
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 80906 270 105480 1926.28 1242
global segment-length histogram

Files

Filename Size md5
ENCFF155FWO.bed.gz 1.83 MB 92493ea0a9d3aa4e58ca1c4c6892cdef
ENCFF155FWO.tabix.bed.gz 866.65 KB 5bb4d3f23d575ff8ae123c15ef825337
ENCFF155FWO.tabix.bed.gz.tbi 247.5 KB 3a5fddd3478799c52a80c6f3cc2fe1e4
genomic_resource.yaml 1.7 KB 405d1e18c36e53537c18932cb520e0c6
statistics/