Resource

Id Histone_ChIP-seq/ENCSR829EYMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR829EYM [biosample_summary="Homo sapiens pancreas tissue female adult (41 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR829EYM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue female adult (41 years)
  • date_created: 2021-01-28T22:02:00.576532+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR829EYM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR829EYM float

Histone_ChIP-seq_ENCSR829EYM
Histone_ChIP-seq ENCSR829EYM [biosample_summary="Homo sapiens pancreas tissue female adult (41 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR829EYM [1.62, 9.76]
n
73,068,518
mean
3.59
sd
0.928

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 730685182.27% 88795
chr1 7731169 3.11% 8955
chr2 6028037 2.49% 7439
chr3 4885523 2.46% 6017
chr4 3499393 1.84% 4415
chr5 3955274 2.18% 4805
chr6 4408225 2.58% 5531
chr7 3717042 2.33% 4718
chr8 3326356 2.29% 4153
chr9 3303590 2.39% 3882
chr10 3689086 2.76% 4446
chr11 3690654 2.73% 4418
chr12 3626088 2.72% 4472
chr13 1830238 1.60% 2300
chr14 2743865 2.56% 3167
chr15 2674256 2.62% 3082
chr16 2374356 2.63% 2880
chr17 3458456 4.15% 4036
chr18 1430972 1.78% 1794
chr19 2038233 3.48% 2605
chr20 1850608 2.87% 2159
chr21 739607 1.58% 931
chr22 1534714 3.02% 1688
chrX 532776 0.34% 902
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 88795 225 16582 822.89 628
global segment-length histogram

Files

Filename Size md5
ENCFF453GYD.bed.gz 1.74 MB 8c4e5a48e4d950516a63d2560ba0595b
ENCFF453GYD.tabix.bed.gz 906.96 KB 4f3b767478a7def5e9e6bf84ff276f65
ENCFF453GYD.tabix.bed.gz.tbi 279.79 KB d8f82ba4afb9ffafd9cdfb1714f107b5
genomic_resource.yaml 1.5 KB 9e3768e692ae4aa53435f6e1553e79b6
statistics/