Resource
| Id | Histone_ChIP-seq/ENCSR822ZAQ |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR822ZAQ [biosample_summary="Homo sapiens BLaER1 12 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me3"] |
| Description |
status: released biological_replicates: Rep 1 summary: 12 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR822ZAQ | float |
Histone_ChIP-seq_ENCSR822ZAQ |
Histone_ChIP-seq ENCSR822ZAQ [biosample_summary="Homo sapiens BLaER1 12 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me3"]
|
 |
[1.38, 92.9] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 58061881 | 1.80% | 60706 |
| chr1 | 5413784 | 2.17% | 5438 |
| chr1_KI270706v1_random | 306 | 0.17% | 1 |
| chr1_KI270708v1_random | 308 | 0.24% | 1 |
| chr1_KI270709v1_random | 1606 | 2.40% | 4 |
| chr1_KI270712v1_random | 3148 | 1.79% | 7 |
| chr1_KI270713v1_random | 2107 | 5.17% | 4 |
| chr1_KI270714v1_random | 250 | 0.60% | 1 |
| chr2 | 3825659 | 1.58% | 4254 |
| chr3 | 2851027 | 1.44% | 2934 |
| chr3_GL000221v1_random | 803 | 0.52% | 1 |
| chr4 | 2070886 | 1.09% | 2142 |
| chr4_GL000008v2_random | 3548 | 1.69% | 4 |
| chr5 | 2685485 | 1.48% | 2744 |
| chr6 | 2870409 | 1.68% | 2707 |
| chr7 | 2804458 | 1.76% | 3034 |
| chr8 | 2329998 | 1.61% | 2568 |
| chr9 | 2397677 | 1.73% | 2561 |
| chr9_KI270717v1_random | 389 | 0.97% | 1 |
| chr9_KI270719v1_random | 807 | 0.46% | 2 |
| chr10 | 2584705 | 1.93% | 2874 |
| chr11 | 2906367 | 2.15% | 2880 |
| chr12 | 2895933 | 2.17% | 2874 |
| chr13 | 1147567 | 1.00% | 1252 |
| chr14 | 1862344 | 1.74% | 1897 |
| chr14_GL000009v2_random | 615 | 0.30% | 1 |
| chr14_GL000194v1_random | 2324 | 1.21% | 5 |
| chr14_GL000225v1_random | 4090 | 1.94% | 12 |
| chr14_KI270723v1_random | 521 | 1.37% | 1 |
| chr14_KI270724v1_random | 663 | 1.68% | 2 |
| chr14_KI270725v1_random | 917 | 0.53% | 3 |
| chr15 | 1784941 | 1.75% | 1838 |
| chr16 | 2655256 | 2.94% | 2792 |
| chr16_KI270728v1_random | 2541 | 0.14% | 8 |
| chr17 | 3637720 | 4.37% | 3548 |
| chr17_GL000205v2_random | 11022 | 5.94% | 7 |
| chr17_KI270729v1_random | 17550 | 6.25% | 29 |
| chr17_KI270730v1_random | 5770 | 5.13% | 15 |
| chr18 | 935857 | 1.16% | 1021 |
| chr19 | 4696314 | 8.01% | 5080 |
| chr20 | 1658971 | 2.57% | 1795 |
| chr21 | 814105 | 1.74% | 998 |
| chr22 | 1561882 | 3.07% | 1669 |
| chr22_KI270732v1_random | 382 | 0.92% | 1 |
| chr22_KI270733v1_random | 4020 | 2.24% | 11 |
| chr22_KI270735v1_random | 1337 | 3.12% | 3 |
| chr22_KI270736v1_random | 11759 | 6.46% | 30 |
| chr22_KI270737v1_random | 2027 | 1.95% | 6 |
| chr22_KI270738v1_random | 397 | 0.40% | 1 |
| chrUn_GL000195v1 | 4240 | 2.32% | 5 |
| chrUn_GL000214v1 | 904 | 0.66% | 3 |
| chrUn_GL000216v2 | 26063 | 14.76% | 55 |
| chrUn_GL000219v1 | 4353 | 2.43% | 4 |
| chrUn_GL000220v1 | 1949 | 1.20% | 6 |
| chrUn_GL000224v1 | 1331 | 0.74% | 3 |
| chrUn_KI270435v1 | 639 | 0.69% | 1 |
| chrUn_KI270438v1 | 11615 | 10.32% | 17 |
| chrUn_KI270442v1 | 18225 | 4.65% | 42 |
| chrUn_KI270512v1 | 697 | 3.07% | 2 |
| chrUn_KI270519v1 | 767 | 0.56% | 1 |
| chrUn_KI270589v1 | 1222 | 2.75% | 2 |
| chrUn_KI270744v1 | 1525 | 0.91% | 5 |
| chrUn_KI270749v1 | 535 | 0.34% | 2 |
| chrUn_KI270751v1 | 506 | 0.34% | 2 |
| chrUn_KI270753v1 | 250 | 0.40% | 1 |
| chrUn_KI270754v1 | 849 | 2.11% | 3 |
| chrUn_KI270756v1 | 2290 | 2.88% | 8 |
| chrUn_KI270757v1 | 1300 | 1.82% | 2 |
| chrX | 1483308 | 0.95% | 1415 |
| chrY | 28761 | 0.05% | 66 |
| 3297 contigs with no values (121358438 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 60706 | 250 | 19398 | 956.44 | 472 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF803FVE.bed.gz | 1.35 MB | f478a7fdee3b9c5d2a0a9b34fbf29609 |
| ENCFF803FVE.tabix.bed.gz | 640.02 KB | 97ac1dd70e49a657d1b59b843b121e7f |
| ENCFF803FVE.tabix.bed.gz.tbi | 229.59 KB | f5246e0da57677fd199935ab15907e81 |
| genomic_resource.yaml | 3.12 KB | 682f1dceadc79f1bc8921248bf9852eb |
| statistics/ |