| Id: | Histone_ChIP-seq/ENCSR817PGE |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR817PGE [biosamplesummary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: female adult (90 or above years) with Alzheimer's disease output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN343VET|/analyses/ENCAN343VET/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF126WHD|/files/ENCFF126WHD/} processed by ChIP-seq ENCODE4 v1.8.0 GRCh38 pipeline has 29926753 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR817PGE | float |
Histone_ChIP-seq_ENCSR817PGE |
Histone_ChIP-seq ENCSR817PGE [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
|
![]() |
[1.54, 12.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF221SKL.bed.gz | 1.86 MB | 8abde4d084c64b9e7e0b543f1418c2e5 |
| ENCFF221SKL.bed.gz.dvc | 101.0 B | 00c851eb0acc8a3b5dab345265b8704c |
| ENCFF221SKL.tabix.bed.gz | 962.38 KB | f45deac47f7a4d6048ed7bf54a7002ac |
| ENCFF221SKL.tabix.bed.gz.dvc | 106.0 B | 4e28cbb35d18f2e5853c296cbd61166f |
| ENCFF221SKL.tabix.bed.gz.tbi | 169.73 KB | 86dc43ab2c6b29d06d348196e730307c |
| ENCFF221SKL.tabix.bed.gz.tbi.dvc | 110.0 B | 7464e570e00a87cd47ab401a6f5fef4e |
| genomic_resource.yaml | 2.24 KB | 2b13b106525dc0bded198517c7836b63 |
| genomic_resource_original.yaml | 2.05 KB | 782aa6b93ab395688118cb62bf1e1790 |
| statistics/ |