Resource

Id Histone_ChIP-seq/ENCSR817JNEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR817JNE [biosample_summary="Homo sapiens heart left ventricle tissue male adult (66 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR817JNE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (66 years)
  • date_created: 2021-08-25T18:07:37.763590+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR817JNE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (66 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR817JNE float

Histone_ChIP-seq_ENCSR817JNE
Histone_ChIP-seq ENCSR817JNE [biosample_summary="Homo sapiens heart left ventricle tissue male adult (66 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR817JNE [1.56, 10.6]
n
111,422,977
mean
3.7
sd
1.08

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1114229773.46% 115143
chr1 11281064 4.53% 11252
chr2 9230245 3.81% 9372
chr3 8462846 4.27% 8672
chr4 4604744 2.42% 5102
chr5 6306878 3.47% 6570
chr6 6209294 3.64% 6704
chr7 5019880 3.15% 5590
chr8 4860244 3.35% 5245
chr9 4823293 3.49% 4826
chr10 6306212 4.71% 6253
chr11 5944505 4.40% 6121
chr12 5725072 4.30% 5727
chr13 2869119 2.51% 3047
chr14 3702433 3.46% 3723
chr15 4289960 4.21% 4311
chr16 3461128 3.83% 3606
chr17 5381937 6.46% 5313
chr18 2260358 2.81% 2488
chr19 3335032 5.69% 3466
chr20 3021503 4.69% 3069
chr21 1054322 2.26% 1157
chr22 2704564 5.32% 2599
chrX 559278 0.36% 911
chrY 9066 0.02% 19
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 115143 240 30706 967.69 701
global segment-length histogram

Files

Filename Size md5
ENCFF469MJE.bed.gz 2.38 MB 9eaa9484094a84febe2a7938cfa8af84
ENCFF469MJE.tabix.bed.gz 1.16 MB 8ab8374b228d2f6d906aa2c27c2ecc78
ENCFF469MJE.tabix.bed.gz.tbi 295.08 KB 1ab872a7290fc662901c08346be28f2f
genomic_resource.yaml 1.53 KB bae4da540562ac51a259af4b4f27b8ee
statistics/