Resource

Id Histone_ChIP-seq/ENCSR817FGUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR817FGU [biosample_summary="Homo sapiens right atrium auricular region tissue female adult (51 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR817FGU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006631/
  • biosample_summary: Homo sapiens right atrium auricular region tissue female adult (51 years)
  • date_created: 2019-07-29T21:04:33.689480+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR817FGU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR817FGU float

Histone_ChIP-seq_ENCSR817FGU
Histone_ChIP-seq ENCSR817FGU [biosample_summary="Homo sapiens right atrium auricular region tissue female adult (51 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR817FGU [1.61, 12.4]
n
132,298,048
mean
4.03
sd
1.35

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1322980484.11% 133104
chr1 13460836 5.41% 13235
chr2 10426004 4.30% 10742
chr3 9303108 4.69% 9499
chr4 5087343 2.67% 5766
chr5 7061886 3.89% 7419
chr6 6926087 4.05% 7599
chr7 6144984 3.86% 6538
chr8 5515587 3.80% 5845
chr9 5930153 4.28% 5646
chr10 7392933 5.53% 7213
chr11 7314088 5.41% 6943
chr12 6608770 4.96% 6605
chr13 3007176 2.63% 3289
chr14 4363179 4.08% 4257
chr15 5068723 4.97% 5034
chr16 4529072 5.01% 4355
chr17 6916408 8.31% 6126
chr18 2562764 3.19% 2919
chr19 4956500 8.46% 4433
chr20 3896463 6.05% 3738
chr21 1431360 3.06% 1493
chr22 3455949 6.80% 3069
chrX 938412 0.60% 1340
chrY 263 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 133104 245 46452 993.94 708
global segment-length histogram

Files

Filename Size md5
ENCFF148VPK.bed.gz 2.65 MB 6ff53520232e3731eba4e0f52ef874da
ENCFF148VPK.tabix.bed.gz 1.32 MB d308ac33bf87842515c1e3b85883f9b7
ENCFF148VPK.tabix.bed.gz.tbi 319.7 KB 4b3e0bae130bd6ef72b2da702da4213b
genomic_resource.yaml 1.57 KB 2a1cc4017905466becec310d613779f9
statistics/