Resource

Id Histone_ChIP-seq/ENCSR815VLQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR815VLQ [biosample_summary="Homo sapiens neurosphere female embryo (17 weeks) originated from cortex" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR815VLQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_NTR_0000427/
  • biosample_summary: Homo sapiens neurosphere female embryo (17 weeks) originated from cortex
  • date_created: 2015-09-15T20:27:16.659318+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR815VLQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (17 weeks)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR815VLQ float

Histone_ChIP-seq_ENCSR815VLQ
Histone_ChIP-seq ENCSR815VLQ [biosample_summary="Homo sapiens neurosphere female embryo (17 weeks) originated from cortex" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR815VLQ [1.89, 11.8]
n
81,901,798
mean
4.49
sd
1.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 819017982.55% 114031
chr1 8020286 3.22% 11344
chr2 5698066 2.35% 8774
chr3 4639204 2.34% 6828
chr4 2881679 1.51% 4468
chr5 3736931 2.06% 5658
chr6 3016764 1.77% 4515
chr7 3851045 2.42% 5455
chr8 2608070 1.80% 3933
chr9 3653745 2.64% 4808
chr10 3337705 2.49% 5011
chr11 4263487 3.16% 5757
chr12 4534605 3.40% 6154
chr13 1506632 1.32% 2436
chr14 2739407 2.56% 4076
chr15 2862037 2.81% 4176
chr16 4158357 4.60% 5107
chr17 5292564 6.36% 6817
chr18 1313144 1.63% 2143
chr19 6899295 11.77% 7520
chr20 2794583 4.34% 3696
chr21 926442 1.98% 1260
chr22 2543327 5.00% 3018
chrX 624423 0.40% 1077
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 114031 190 16756 718.24 523
global segment-length histogram

Files

Filename Size md5
ENCFF168ZFZ.bed.gz 1.91 MB a48b296b1e0e05943f003f8fb1eaddff
ENCFF168ZFZ.tabix.bed.gz 1.04 MB 21d72adc1243861388b297be1d02dd74
ENCFF168ZFZ.tabix.bed.gz.tbi 172.39 KB e0690ff9d3f47c76ce4bd1c8f631d2a9
genomic_resource.yaml 2.07 KB 417a74bf6e947905439b57814175c3bd
statistics/