Resource

Id Histone_ChIP-seq/ENCSR814QIVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR814QIV [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR814QIV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2022-05-11T01:54:24.354209+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR814QIV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (90 or above years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR814QIV float

Histone_ChIP-seq_ENCSR814QIV
Histone_ChIP-seq ENCSR814QIV [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR814QIV [1.67, 56.8]
n
142,195,529
mean
10.1
sd
7.54

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1421955294.42% 88817
chr1 14317737 5.75% 8526
chr2 10404920 4.30% 6758
chr3 8692989 4.38% 5557
chr4 5849660 3.08% 3805
chr5 7675018 4.23% 5081
chr6 7320321 4.29% 4705
chr7 6650482 4.17% 4447
chr8 5606266 3.86% 3639
chr9 6936687 5.01% 4117
chr10 7246497 5.42% 4387
chr11 8662419 6.41% 5070
chr12 7267395 5.45% 4651
chr13 3305022 2.89% 2148
chr14 4952696 4.63% 2976
chr15 5001250 4.90% 3056
chr16 4922860 5.45% 3057
chr17 7975523 9.58% 4651
chr18 2855817 3.55% 1900
chr19 5657318 9.65% 3410
chr20 4064030 6.31% 2436
chr21 1539968 3.30% 1016
chr22 3274746 6.44% 1974
chrX 2015908 1.29% 1450
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 88817 208 118359 1600.99 994
global segment-length histogram

Files

Filename Size md5
ENCFF448UVY.bed.gz 1.93 MB e6c3136f2e46ee19697c1d3f00c9ea80
ENCFF448UVY.tabix.bed.gz 930.86 KB bb5d7817fd51db961338e8ebf14b75bd
ENCFF448UVY.tabix.bed.gz.tbi 254.1 KB 422ee036a4412f0de7d0f6d1f448fa37
genomic_resource.yaml 1.75 KB 65adbd15a0a210d3a88bcb670d74d31a
statistics/