Resource

Id Histone_ChIP-seq/ENCSR813ULWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR813ULW [biosample_summary="Homo sapiens myoepithelial cell of mammary gland female adult (36 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR813ULW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0002324/
  • biosample_summary: Homo sapiens myoepithelial cell of mammary gland female adult (36 years)
  • date_created: 2015-09-15T20:27:46.746516+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR813ULW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (36 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR813ULW float

Histone_ChIP-seq_ENCSR813ULW
Histone_ChIP-seq ENCSR813ULW [biosample_summary="Homo sapiens myoepithelial cell of mammary gland female adult (36 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR813ULW [1.82, 13.2]
n
76,133,350
mean
5.27
sd
1.53

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 761333502.37% 127180
chr1 8346019 3.35% 13272
chr2 6113506 2.52% 10431
chr3 5147132 2.60% 8817
chr4 2560764 1.35% 4785
chr5 3907596 2.15% 6757
chr6 3720440 2.18% 6732
chr7 3218437 2.02% 5703
chr8 3219548 2.22% 5635
chr9 3395401 2.45% 5542
chr10 3966040 2.96% 6621
chr11 4870481 3.61% 7742
chr12 3576507 2.68% 6117
chr13 1415412 1.24% 2655
chr14 2531801 2.37% 4128
chr15 2643833 2.59% 4327
chr16 2823835 3.13% 4559
chr17 4221005 5.07% 6321
chr18 1671260 2.08% 2926
chr19 2700165 4.61% 4135
chr20 2464911 3.82% 4052
chr21 1030877 2.21% 1734
chr22 2190158 4.31% 3252
chrX 398222 0.26% 937
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 127180 145 10144 598.63 490
global segment-length histogram

Files

Filename Size md5
ENCFF849KAR.bed.gz 2.28 MB d6dafb451e6b9388ddc16f905a952bd9
ENCFF849KAR.tabix.bed.gz 1.18 MB 5bfce418a2c3f02620fb157c39ccc7c9
ENCFF849KAR.tabix.bed.gz.tbi 341.18 KB da269cdd29aabe8d5e459cce441eabc9
genomic_resource.yaml 2.07 KB 7f1b581e1f7c139ba9686c4f975cf790
statistics/